C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium homeostasis endoplasmic reticulum protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079510 Cherp-201 ENSMUSG00000052488 10090 - 8:72460489-72475233 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079510
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079510 12.939±2.76 18.107±2.17 11.953±1.23 18.510±10.30 13.469±6.46 11.448±1.72 6.650±2.16 9.551±1.30 11.424±7.25 11.532±1.70 5.129±1.26 15.714±4.73 18.520±7.49 17.313±4.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DY CIL_0004DY_0003 CGP 8:72443880-72475233
CIL_00071T CIL_00071T_0002 CGP 8:72460489-72492614

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0006396 IEA RNA processing
GO:0006874 IEA cellular calcium ion homeostasis
GO:0008285 IEA negative regulation of cell proliferation
GO:0016020 IEA membrane
GO:0033017 IEA sarcoplasmic reticulum membrane
GO:0044325 IEA ion channel binding
GO:0044822 IEA poly(A) RNA binding
GO:0048471 IEA perinuclear region of cytoplasm
GO:0051209 IEA release of sequestered calcium ion into cytosol
GO:0051533 IEA positive regulation of NFAT protein import into nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000198939 CHERP-003 protein_coding Homo_sapiens 0 2021
ENST00000546361 CHERP-001 protein_coding Homo_sapiens 0 2933
ENST00000546538 CHERP-004 retained_intron Homo_sapiens 0 763
ENST00000551747 CHERP-006 retained_intron Homo_sapiens 0 276

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