C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004E8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000183798-ENSG00000124177 CGP 9606 20:41359966-41618494
GeneTranscriptPositionBiotype
ENSG00000132793 (LPIN3)
lipin 3 		ENST00000373257 (LPIN3-001) 41340920-41360582 protein_coding
ENST00000445975 (LPIN3-003) 41352681-41358470 protein_coding
ENST00000491528 (LPIN3-004) 41357976-41358893 processed_transcript
ENST00000496565 (LPIN3-002) 41357111-41358829 processed_transcript
ENSG00000183798 (EMILIN3)
elastin microfibril interfacer 3 		ENST00000332312 (EMILIN3-001) 41359966-41366827 protein_coding
ENSG00000229398 (RP4-620E11.5)
 ENST00000440222 (RP4-620E11.5-001) 41382383-41383107 processed_pseudogene
ENSG00000232493 (RPL12P11)
ribosomal protein L12 pseudogene 11 		ENST00000439970 (RPL12P11-001) 41547422-41547922 processed_pseudogene
ENSG00000235088 (RP4-620E11.4)
 ENST00000423903 (RP4-620E11.4-001) 41459354-41461944 processed_pseudogene
ENSG00000273951 (RP4-620E11.8)
 ENST00000620124 (RP4-620E11.8-001) 41485571-41486225 sense_intronic
CIL_0004E8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050700-ENSMUSG00000057133 CGP 10090 2:160906437-161109075
GeneTranscriptPositionBiotype
ENSMUSG00000050700 (Emilin3)
elastin microfibril interfacer 3 		ENSMUST00000057169 (Emilin3-201) 160906438-160912328 protein_coding
ENSMUST00000109454 (Emilin3-001) 160906437-160912317 protein_coding
ENSMUSG00000057133 (Chd6)
chromodomain helicase DNA binding protein 6 		ENSMUST00000039782 (Chd6-003) 160946978-161109022 protein_coding
ENSMUST00000125179 (Chd6-002) 161035031-161109004 retained_intron
ENSMUST00000130265 (Chd6-004) 161029839-161052578 protein_coding
ENSMUST00000134178 (Chd6-001) 160983184-161109022 protein_coding
ENSMUST00000137152 (Chd6-011) 160960064-160964796 processed_transcript
ENSMUST00000137831 (Chd6-009) 161014092-161018249 processed_transcript
ENSMUST00000138078 (Chd6-005) 161008034-161109075 retained_intron
ENSMUST00000143081 (Chd6-007) 160959943-160961521 processed_transcript
ENSMUST00000149866 (Chd6-010) 160991818-161008493 retained_intron
ENSMUST00000155066 (Chd6-008) 161025886-161029548 processed_transcript
ENSMUST00000155918 (Chd6-006) 160980482-160985046 retained_intron
ENSMUSG00000087147 (Gm14228)
predicted gene 14228 		ENSMUST00000131908 (Gm14228-001) 160925541-160926648 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004E8_0001ENSG00000132793ENST00000373257ENST00000445975ENST00000491528ENST00000496565ENSG00000183798ENST00000332312ENSG00000229398ENST00000440222ENSG00000232493ENST00000439970ENSG00000235088ENST00000423903ENSG00000273951ENST00000620124CIL_0004E8_0002ENSMUSG00000050700ENSMUST00000057169ENSMUST00000109454ENSMUSG00000057133ENSMUST00000039782ENSMUST00000125179ENSMUST00000130265ENSMUST00000134178ENSMUST00000137152ENSMUST00000137831ENSMUST00000138078ENSMUST00000143081ENSMUST00000149866ENSMUST00000155066ENSMUST00000155918ENSMUSG00000087147ENSMUST00000131908
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004E8_0001ENSG00000132793ENST00000373257ENST00000496565ENSG00000183798ENST00000332312ENSG00000229398ENST00000440222ENSG00000232493ENST00000439970ENSG00000235088ENST00000423903ENSG00000273951ENST00000620124CIL_0004E8_0002ENSMUSG00000050700ENSMUST00000057169ENSMUST00000109454ENSMUSG00000057133ENSMUST00000039782ENSMUSG00000087147ENSMUST00000131908
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132793 ENST00000373257 1.154±0.00 N/A N/A 0.082±0.00 1.161±0.68 N/A 1.192±0.00 N/A 0.212±0.00 0.362±0.11 N/A 3.322±1.54 0.643±0.00 1.439±0.00
ENST00000445975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.565±0.00 N/A N/A N/A
ENSG00000183798 ENST00000332312 0.603±0.00 1.031±0.00 N/A 1.213±0.99 1.232±1.12 1.322±0.71 1.398±0.66 N/A 0.649±0.00 1.171±0.00 0.187±0.11 3.454±2.62 0.357±0.07 3.549±2.61
ENSG00000229398 ENST00000440222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.032±0.00 N/A N/A
ENSG00000232493 ENST00000439970 0.087±0.00 N/A 0.088±0.00 0.158±0.00 0.217±0.00 N/A 0.054±0.00 0.030±0.00 N/A 0.142±0.00 N/A 0.050±0.00 N/A 0.050±0.00
ENSG00000235088 ENST00000423903 N/A N/A N/A 0.922±0.00 N/A 3.720±0.00 N/A N/A N/A N/A N/A 0.510±0.32 N/A N/A
ENSG00000273951 ENST00000620124 0.197±0.00 0.114±0.00 1.278±0.00 0.221±0.02 0.795±0.68 0.011±0.00 0.012±0.00 1.720±1.66 0.493±0.45 0.253±0.00 N/A 0.278±0.18 0.125±0.04 0.097±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000050700 ENSMUST00000057169 0.121±0.06 0.162±0.00 0.026±0.00 0.648±0.00 N/A 0.305±0.03 0.019±0.01 N/A 0.058±0.06 N/A N/A 0.580±0.22 0.087±0.00 0.555±0.30
ENSMUST00000109454 0.128±0.05 0.109±0.07 0.045±0.00 0.769±0.50 0.080±0.02 0.183±0.11 0.030±0.00 0.015±0.00 0.083±0.11 0.089±0.05 0.099±0.03 0.974±0.14 0.152±0.09 1.336±0.43
ENSMUSG00000057133 ENSMUST00000039782 2.423±1.23 1.638±0.59 3.735±0.15 7.502±2.12 2.000±0.81 1.367±0.42 1.411±0.35 1.648±0.59 0.757±0.22 2.534±0.87 1.057±0.27 3.789±2.96 2.811±1.47 0.826±0.09
ENSMUST00000125179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087147 ENSMUST00000131908 N/A N/A 0.024±0.01 0.037±0.00 N/A N/A N/A N/A N/A N/A N/A 0.094±0.00 N/A 0.128±0.00

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