C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004FC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000077584-ENSDARG00000075800 CGP 7955 7:35942441-35950665
GeneTranscriptPositionBiotype
ENSDARG00000075800 (calml4a)
calmodulin-like 4a 		ENSDART00000109635 (calml4a-201) 35947318-35950665 protein_coding
ENSDARG00000077584 (cln6a)
ceroid-lipofuscinosis, neuronal 6a 		ENSDART00000109872 (cln6a-201) 35942441-35947151 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0004FC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000090002-ENSDARG00000059347 CGP 7955 25:1378447-1436673
GeneTranscriptPositionBiotype
ENSDARG00000059347 (calml4b)
calmodulin-like 4b 		ENSDART00000082447 (calml4b-201) 1389329-1400692 protein_coding
ENSDART00000156062 (calml4b-001) 1389161-1401064 protein_coding
ENSDART00000156532 (calml4b-003) 1389328-1418511 protein_coding
ENSDART00000157163 (calml4b-002) 1389277-1436673 protein_coding
ENSDARG00000059348 (rxfp3.3b)
relaxin/insulin-like family peptide receptor 3.3b 		ENSDART00000082449 (rxfp3.3b-201) 1407759-1408790 protein_coding
ENSDART00000155229 (rxfp3.3b-001) 1407567-1408778 protein_coding
ENSDARG00000090002 (cln6b)
ceroid-lipofuscinosis, neuronal 6b 		ENSDART00000127656 (cln6b-001) 1378447-1387005 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0004FC_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032245-ENSMUSG00000032246 CGP 10090 9:62838785-62875918
GeneTranscriptPositionBiotype
ENSMUSG00000032245 (Cln6)
ceroid-lipofuscinosis, neuronal 6 		ENSMUST00000034776 (Cln6-001) 62838785-62852006 protein_coding
ENSMUST00000124984 (Cln6-004) 62847033-62851162 protein_coding
ENSMUST00000138276 (Cln6-003) 62846015-62850711 nonsense_mediated_decay
ENSMUST00000141821 (Cln6-002) 62838792-62846018 nonsense_mediated_decay
ENSMUSG00000032246 (Calml4)
calmodulin-like 4 		ENSMUST00000034777 (Calml4-201) 62858104-62875918 protein_coding
ENSMUST00000163820 (Calml4-202) 62858104-62875918 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004FC_0001ENSDARG00000075800ENSDART00000109635ENSDARG00000077584ENSDART00000109872CIL_0004FC_0002ENSDARG00000059347ENSDART00000082447ENSDART00000156062ENSDART00000156532ENSDART00000157163ENSDARG00000059348ENSDART00000082449ENSDART00000155229ENSDARG00000090002ENSDART00000127656CIL_0004FC_0003ENSMUSG00000032245ENSMUST00000034776ENSMUST00000124984ENSMUST00000138276ENSMUST00000141821ENSMUSG00000032246ENSMUST00000034777ENSMUST00000163820
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004FC_0001ENSDARG00000075800ENSDART00000109635ENSDARG00000077584ENSDART00000109872CIL_0004FC_0002ENSDARG00000059347ENSDART00000082447ENSDART00000156062ENSDART00000156532ENSDART00000157163ENSDARG00000059348ENSDART00000082449ENSDART00000155229ENSDARG00000090002ENSDART00000127656CIL_0004FC_0003ENSMUSG00000032245ENSMUST00000034776ENSMUST00000138276ENSMUSG00000032246ENSMUST00000034777ENSMUST00000163820
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000075800 ENSDART00000109635 N/A N/A N/A 0.224±0.00 N/A N/A N/A 1.926±1.62 0.091±0.00 N/A 0.883±0.00 N/A N/A N/A
ENSDARG00000077584 ENSDART00000109872 N/A N/A N/A 6.747±1.88 N/A N/A 2.953±1.39 6.470±1.31 0.365±0.00 N/A 0.789±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000059347 ENSDART00000082447 N/A N/A N/A 0.504±0.00 N/A N/A 0.278±0.00 N/A 0.178±0.00 N/A N/A N/A N/A N/A
ENSDART00000156062 N/A N/A N/A 0.097±0.01 N/A N/A N/A 0.115±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000156532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.125±0.00 N/A N/A N/A
ENSDART00000157163 N/A N/A N/A 0.273±0.00 N/A N/A N/A 1.516±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000059348 ENSDART00000082449 N/A N/A N/A N/A N/A N/A N/A 0.088±0.00 0.033±0.00 N/A N/A N/A N/A N/A
ENSDART00000155229 N/A N/A N/A 2.252±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000090002 ENSDART00000127656 N/A N/A N/A 0.201±0.04 N/A N/A N/A 0.717±0.50 0.038±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032245 ENSMUST00000034776 14.834±5.53 23.752±1.01 12.190±0.69 3.015±1.21 17.482±0.70 26.076±2.76 8.751±2.19 28.033±1.55 7.531±5.96 17.535±0.81 6.155±0.40 21.843±7.25 27.855±16.98 31.680±15.53
ENSMUST00000124984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.475±0.00
ENSMUST00000141821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000032246 ENSMUST00000034777 2.349±1.47 0.403±0.19 5.161±1.17 1.692±0.43 1.003±0.26 34.315±5.05 0.602±0.03 104.985±4.76 0.593±0.38 7.053±1.10 0.728±0.28 5.257±2.72 3.941±2.14 1.826±1.56
ENSMUST00000163820 1.104±0.39 0.713±0.28 5.126±0.23 1.832±0.07 1.239±1.21 6.445±0.98 0.400±0.21 52.791±16.41 0.685±0.37 N/A 0.443±0.29 3.072±1.90 3.840±1.38 2.207±1.55

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