C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004FQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000007362-ENSDARG00000093768 CGP 7955 13:4023088-4060740
GeneTranscriptPositionBiotype
ENSDARG00000007362 (sft2d1)
SFT2 domain containing 1 		ENSDART00000108935 (sft2d1-201) 4023088-4055399 protein_coding
ENSDART00000135113 (sft2d1-001) 4034911-4055400 protein_coding
ENSDARG00000093768 (prr18)
proline rich 18 		ENSDART00000148280 (prr18-001) 4060128-4060740 protein_coding
CIL_0004FQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000073468-ENSMUSG00000073468 CGP 10090 17:8311102-8396852
GeneTranscriptPositionBiotype
ENSMUSG00000055945 (Prr18)
proline rich 18 		ENSMUST00000069742 (Prr18-201) 8340406-8344112 protein_coding
ENSMUST00000163887 (Prr18-202) 8340739-8344112 protein_coding
ENSMUSG00000058159 (T2)
brachyury 2 		ENSMUST00000163578 (T2-201) 8372396-8422728 processed_transcript
ENSMUST00000169635 (T2-001) 8396629-8422728 processed_transcript
ENSMUSG00000073468 (Sft2d1)
SFT2 domain containing 1 		ENSMUST00000128087 (Sft2d1-009) 8324386-8327440 retained_intron
ENSMUST00000130782 (Sft2d1-004) 8311122-8327055 nonsense_mediated_decay
ENSMUST00000135627 (Sft2d1-006) 8311139-8327008 processed_transcript
ENSMUST00000135964 (Sft2d1-008) 8320548-8327062 retained_intron
ENSMUST00000140890 (Sft2d1-010) 8311109-8396852 processed_transcript
ENSMUST00000141213 (Sft2d1-005) 8311175-8318208 retained_intron
ENSMUST00000145276 (Sft2d1-002) 8311169-8327440 nonsense_mediated_decay
ENSMUST00000150728 (Sft2d1-003) 8311102-8327442 retained_intron
ENSMUST00000153406 (Sft2d1-007) 8318729-8324463 retained_intron
ENSMUST00000154553 (Sft2d1-001) 8311102-8327442 protein_coding
ENSMUSG00000097796 (Gm16702)
predicted gene, 16702 		ENSMUST00000181180 (Gm16702-201) 8379045-8389468 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004FQ_0001ENSDARG00000007362ENSDART00000108935ENSDART00000135113ENSDARG00000093768ENSDART00000148280CIL_0004FQ_0002ENSMUSG00000055945ENSMUST00000069742ENSMUST00000163887ENSMUSG00000058159ENSMUST00000163578ENSMUST00000169635ENSMUSG00000073468ENSMUST00000128087ENSMUST00000130782ENSMUST00000135627ENSMUST00000135964ENSMUST00000140890ENSMUST00000141213ENSMUST00000145276ENSMUST00000150728ENSMUST00000153406ENSMUST00000154553ENSMUSG00000097796ENSMUST00000181180
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004FQ_0001ENSDARG00000007362ENSDART00000108935ENSDART00000135113ENSDARG00000093768ENSDART00000148280CIL_0004FQ_0002ENSMUSG00000055945ENSMUST00000069742ENSMUST00000163887ENSMUSG00000058159ENSMUST00000163578ENSMUST00000169635ENSMUSG00000073468ENSMUST00000128087ENSMUST00000135627ENSMUST00000145276ENSMUST00000150728ENSMUST00000153406ENSMUST00000154553ENSMUSG00000097796ENSMUST00000181180
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007362 ENSDART00000108935 N/A N/A N/A 10.452±0.72 N/A N/A 9.215±0.84 9.768±0.00 0.194±0.00 N/A 3.569±0.00 N/A N/A N/A
ENSDART00000135113 N/A N/A N/A 9.613±0.48 N/A N/A 18.657±1.28 15.654±7.00 0.333±0.00 N/A N/A N/A N/A N/A
ENSDARG00000093768 ENSDART00000148280 N/A N/A N/A 14.476±0.00 N/A N/A 0.479±0.41 N/A N/A N/A 1.441±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000055945 ENSMUST00000069742 N/A 0.080±0.01 0.056±0.00 1.282±0.48 0.103±0.02 0.206±0.02 N/A 0.042±0.01 0.046±0.02 3.619±0.58 N/A 2.022±0.86 0.146±0.10 0.142±0.04
ENSMUST00000163887 0.079±0.02 0.057±0.02 0.051±0.01 8.783±5.26 0.083±0.00 0.176±0.07 0.076±0.03 0.034±0.02 0.048±0.02 2.459±0.21 0.020±0.00 1.540±0.55 0.059±0.01 0.032±0.01
ENSMUSG00000058159 ENSMUST00000163578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.604±0.00 N/A N/A
ENSMUST00000169635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.132±0.00 N/A N/A
ENSMUSG00000073468 ENSMUST00000128087 N/A 14.650±5.46 N/A N/A 16.429±0.00 19.980±5.22 N/A N/A N/A N/A N/A 29.460±0.00 N/A N/A
ENSMUST00000130782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135627 N/A N/A N/A 22.947±12.81 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145276 N/A 8.877±1.14 N/A 20.794±8.74 9.196±0.00 10.822±0.00 N/A N/A N/A N/A N/A N/A N/A 4.479±0.53
ENSMUST00000150728 2.677±0.29 2.184±0.09 8.392±0.06 8.182±5.37 4.376±0.86 4.614±0.48 1.496±0.22 N/A 2.809±0.25 4.121±0.54 0.489±0.33 4.156±1.69 1.931±0.74 1.177±0.36
ENSMUST00000153406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.827±0.25 10.004±0.00 17.952±3.92 N/A
ENSMUST00000154553 20.339±2.41 22.522±9.20 47.147±7.31 10.586±1.89 30.113±11.79 36.683±8.04 7.921±1.89 30.398±2.54 35.034±11.33 39.238±5.76 1.491±0.52 30.905±7.40 28.352±19.82 11.875±0.28
ENSMUSG00000097796 ENSMUST00000181180 N/A N/A N/A 2.380±0.00 N/A N/A N/A N/A N/A N/A 0.311±0.10 2.258±0.00 1.738±0.69 1.073±0.00

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