C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SFT2 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154553 Sft2d1-001 ENSMUSG00000073468 10090 + 17:8311102-8327442 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000154553
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000154553 20.339±2.41 22.522±9.20 47.147±7.31 10.586±1.89 30.113±11.79 36.683±8.04 7.921±1.89 30.398±2.54 35.034±11.33 39.238±5.76 1.491±0.52 30.905±7.40 28.352±19.82 11.875±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FQ CIL_0004FQ_0002 CGP 17:8311102-8396852

Gene Ontology

GO IDEvidence TypeGO Description
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361731 SFT2D1-002 protein_coding Homo_sapiens 0 545
ENST00000478705 SFT2D1-004 processed_transcript Homo_sapiens 0 446
ENST00000487841 SFT2D1-003 processed_transcript Homo_sapiens 0 414
ENST00000488773 SFT2D1-001 processed_transcript Homo_sapiens 0 414
ENST00000494682 SFT2D1-006 processed_transcript Homo_sapiens 1e-33 147

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