C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SFT2 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145276 Sft2d1-002 ENSMUSG00000073468 10090 + 17:8311169-8327440 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonTestisENSMUST00000145276
Transcript ID Adrenal Brain Breast Colon Testis
ENSMUST00000145276 8.877±1.14 20.794±8.74 9.196±0.00 10.822±0.00 4.479±0.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FQ CIL_0004FQ_0002 CGP 17:8311102-8396852

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361731 SFT2D1-002 protein_coding Homo_sapiens 0 289
ENST00000478705 SFT2D1-004 processed_transcript Homo_sapiens 0 289
ENST00000487841 SFT2D1-003 processed_transcript Homo_sapiens 0 257
ENST00000488773 SFT2D1-001 processed_transcript Homo_sapiens 0 257
ENST00000494682 SFT2D1-006 processed_transcript Homo_sapiens 1e-33 147

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