C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004GZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000057049-ENSDARG00000015110 CGP 7955 17:23600675-23641159
GeneTranscriptPositionBiotype
ENSDARG00000015110 (slc18a2)
solute carrier family 18 (vesicular monoamine), member 2
ENSDART00000025466 (slc18a2-001) 23612151-23641159 protein_coding
ENSDARG00000057049 (kcnk18)
potassium channel, subfamily K, member 18
ENSDART00000079646 (kcnk18-001) 23600675-23609143 protein_coding
CIL_0004GZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000186795-ENSG00000165646 CGP 9606 10:117197489-117279430
GeneTranscriptPositionBiotype
ENSG00000165650 (PDZD8)
PDZ domain containing 8
ENST00000334464 (PDZD8-001) 117277274-117375467 protein_coding
ENST00000482496 (PDZD8-002) 117284307-117314235 processed_transcript
ENST00000489302 (PDZD8-003) 117285108-117318978 processed_transcript
ENST00000489491 (PDZD8-004) 117290186-117374481 processed_transcript
ENSG00000186795 (KCNK18)
potassium channel, subfamily K, member 18
ENST00000334549 (KCNK18-001) 117197489-117210299 protein_coding
ENSG00000277879 (RP11-129M16.4)
ENST00000614747 (RP11-129M16.4-001) 117267116-117268668 antisense
CIL_0004GZ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040901-ENSMUSG00000025094 CGP 10090 19:59219648-59296012
GeneTranscriptPositionBiotype
ENSMUSG00000025094 (Slc18a2)
solute carrier family 18 (vesicular monoamine), member 2
ENSMUST00000026084 (Slc18a2-201) 59260878-59296012 protein_coding
ENSMUSG00000040901 (Kcnk18)
potassium channel, subfamily K, member 18
ENSMUST00000065204 (Kcnk18-201) 59219648-59237370 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004GZ_0001ENSDARG00000015110ENSDART00000025466ENSDARG00000057049ENSDART00000079646CIL_0004GZ_0002ENSG00000165650ENST00000334464ENST00000482496ENST00000489302ENST00000489491ENSG00000186795ENST00000334549ENSG00000277879ENST00000614747CIL_0004GZ_0003ENSMUSG00000025094ENSMUST00000026084ENSMUSG00000040901ENSMUST00000065204
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004GZ_0001ENSDARG00000015110ENSDART00000025466ENSDARG00000057049ENSDART00000079646CIL_0004GZ_0002ENSG00000165650ENST00000334464ENST00000482496ENST00000489302ENSG00000186795ENST00000334549ENSG00000277879ENST00000614747CIL_0004GZ_0003ENSMUSG00000025094ENSMUST00000026084ENSMUSG00000040901ENSMUST00000065204
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015110 ENSDART00000025466 N/A N/A N/A N/A N/A N/A 9.658±7.13 N/A 0.059±0.00 N/A 0.082±0.00 N/A N/A N/A
ENSDARG00000057049 ENSDART00000079646 N/A N/A N/A 0.462±0.35 N/A N/A 0.067±0.00 0.655±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165650 ENST00000334464 6.517±0.00 2.384±0.00 2.129±0.00 6.354±2.65 2.889±0.25 4.614±0.10 2.208±0.88 5.599±0.75 4.074±0.98 3.640±0.47 1.441±0.71 8.551±4.37 1.958±0.45 9.228±2.76
ENST00000482496 N/A N/A N/A N/A N/A N/A 1.878±0.00 N/A N/A N/A N/A 16.091±0.00 N/A 13.693±0.00
ENST00000489302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 33.940±0.00
ENST00000489491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000186795 ENST00000334549 N/A N/A N/A 0.032±0.00 N/A N/A N/A N/A N/A N/A N/A 0.038±0.00 N/A 0.045±0.03
ENSG00000277879 ENST00000614747 N/A N/A N/A N/A 4.173±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025094 ENSMUST00000026084 0.171±0.08 6.646±3.78 0.482±0.00 9.610±6.17 0.628±0.35 1.350±0.85 0.487±0.15 0.833±0.38 0.698±0.63 0.383±0.18 0.414±0.05 42.011±20.23 1.209±0.59 0.234±0.21
ENSMUSG00000040901 ENSMUST00000065204 0.010±0.00 0.017±0.00 0.014±0.01 0.016±0.00 N/A N/A N/A 0.026±0.01 0.005±0.00 N/A 0.021±0.00 0.406±0.20 0.203±0.30 0.039±0.01

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