C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LON peptidase N-terminal domain and ring finger 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147695 Lonrf2-001 ENSMUSG00000048814 10090 - 1:38793669-38836090 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000147695
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000147695 1.409±1.02 2.031±0.29 1.923±0.69 13.268±5.31 0.435±0.09 0.342±0.08 1.452±0.06 0.226±0.03 0.045±0.04 0.177±0.04 0.088±0.03 1.379±0.62 0.058±0.05 0.180±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HL CIL_0004HL_0002 CGP 1:38177326-38836090
CIL_0004HM CIL_0004HM_0002 CGP 1:38793669-38898160

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004176 IEA ATP-dependent peptidase activity
GO:0005575 ND cellular_component
GO:0006200 IEA ATP catabolic process
GO:0006508 IEA proteolysis
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393437 LONRF2-001 protein_coding Homo_sapiens 0 1648
ENST00000409647 LONRF2-002 protein_coding Homo_sapiens 0 1153
ENST00000439212 LONRF2P2-001 processed_pseudogene Homo_sapiens 0 302
ENST00000554326 RP11-32B5.4-001 processed_pseudogene Homo_sapiens 0 322
ENST00000556676 RP11-403B2.3-001 processed_pseudogene Homo_sapiens 0 322
ENST00000584783 LONRF2P1-001 processed_pseudogene Homo_sapiens 0 292
ENST00000619798 AL050303.12-001 processed_pseudogene Homo_sapiens 0 292

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