C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transport and golgi organization 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048359 Tango6-201 ENSMUSG00000041949 10090 + 8:106683068-106851439 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048359
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048359 2.820±0.45 3.060±0.44 1.487±0.15 1.296±0.51 2.025±0.83 1.792±0.28 1.314±0.40 2.057±0.62 1.476±0.59 1.949±0.42 0.877±0.34 4.047±1.54 0.907±0.60 0.996±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004RG CIL_0004RG_0002 CGP 8:106603351-106851439
CIL_0004I6 CIL_0004I6_0002 CGP 8:106683068-106884566

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261778 TANGO6-001 protein_coding Homo_sapiens 0 2222
ENST00000561566 TANGO6-004 retained_intron Homo_sapiens 0 405
ENST00000561856 TANGO6-007 nonsense_mediated_decay Homo_sapiens 0 383
ENST00000561931 TANGO6-011 processed_transcript Homo_sapiens 0 337
ENST00000562000 TANGO6-008 processed_transcript Homo_sapiens 0 444
ENST00000562491 TANGO6-006 retained_intron Homo_sapiens 0 394
ENST00000564180 TANGO6-002 retained_intron Homo_sapiens 0 881
ENST00000565852 TANGO6-005 nonsense_mediated_decay Homo_sapiens 0 532
ENST00000568361 TANGO6-010 retained_intron Homo_sapiens 0 470

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