C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myeloid-associated differentiation marker
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000391770 MYADM-001 ENSG00000179820 9606 + 19:53867883-53876437 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaENST00000391770
Transcript ID Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENST00000391770 0.256±0.00 1.581±0.00 6.587±0.00 4.957±0.00 0.974±0.00 5.678±0.00 15.077±12.96 1.621±0.00 28.236±20.61 73.683±7.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ML CIL_0004ML_0001 CGP 19:53793603-53876437
CIL_0004M7 CIL_0004M7_0001 CGP 19:53866223-53907652

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001726 IDA ruffle
GO:0001933 IMP negative regulation of protein phosphorylation
GO:0003674 ND molecular_function
GO:0005886 IMP plasma membrane
GO:0005911 IDA cell-cell junction
GO:0010629 IMP negative regulation of gene expression
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030335 IMP positive regulation of cell migration
GO:0030837 IMP negative regulation of actin filament polymerization
GO:0030864 IDA cortical actin cytoskeleton
GO:0031579 IMP membrane raft organization
GO:0034115 IDA negative regulation of heterotypic cell-cell adhesion
GO:0045121 IDA membrane raft
GO:0061028 IMP establishment of endothelial barrier
GO:0070062 IDA extracellular vesicular exosome
GO:0072661 IMP protein targeting to plasma membrane
GO:0090038 IMP negative regulation of protein kinase C signaling
GO:1900026 IMP positive regulation of substrate adhesion-dependent cell spreading

Homologs

No Homologs available.

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