C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, DHHC domain containing 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000089473 Zdhhc20-201 ENSMUSG00000021969 10090 - 14:57832702-57890262 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000089473
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000089473 4.391±2.29 12.557±3.17 7.414±2.13 5.777±1.91 5.088±2.58 7.666±1.14 1.072±0.38 2.627±0.62 2.130±0.70 6.995±3.23 0.395±0.21 8.677±2.18 6.186±2.85 2.548±1.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MB CIL_0004MB_0002 CGP 14:57826239-57890262
CIL_0004ME CIL_0004ME_0002 CGP 14:57832702-57999262

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0008270 IEA zinc ion binding
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016409 IEA palmitoyltransferase activity
GO:0018345 IEA protein palmitoylation
GO:0019706 IEA protein-cysteine S-palmitoyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000077373 ZDHHC20 (1 of 2)-001 protein_coding Danio_rerio 5e-27 128
ENSDART00000080997 ZDHHC20 (2 of 2)-201 protein_coding Danio_rerio 9e-25 121
ENSDART00000136860 ZDHHC20 (2 of 2)-001 protein_coding Danio_rerio 9e-25 121
ENST00000320220 ZDHHC20-201 protein_coding Homo_sapiens 0 1206
ENST00000382466 ZDHHC20-202 protein_coding Homo_sapiens 0 1371
ENST00000400590 ZDHHC20-001 protein_coding Homo_sapiens 0 1733
ENST00000411421 ZDHHC20P4-001 processed_pseudogene Homo_sapiens 0 1112
ENST00000415724 ZDHHC20-203 protein_coding Homo_sapiens 0 1441
ENST00000464055 ZDHHC20-002 processed_transcript Homo_sapiens 0 372
ENST00000477811 ZDHHC20-003 processed_transcript Homo_sapiens 0 305
ENST00000484277 ZDHHC20-004 processed_transcript Homo_sapiens 5.04467e-44 180
ENST00000494731 ZDHHC20-006 processed_transcript Homo_sapiens 0 1086
ENST00000542645 ZDHHC20-204 protein_coding Homo_sapiens 0 1238

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