C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004MR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000090338-ENSDARG00000086055 CGP 7955 12:19260522-19388387
GeneTranscriptPositionBiotype
ENSDARG00000086055 (si:dkey-7e14.3)
si:dkey-7e14.3 		ENSDART00000123315 (si:dkey-7e14.3-001) 19384047-19388387 protein_coding
ENSDARG00000090338 (fam20cb)
family with sequence similarity 20, member Cb 		ENSDART00000130741 (fam20cb-001) 19260522-19369618 protein_coding
CIL_0004MR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025854-ENSMUSG00000094504 CGP 10090 5:138754514-138821619
GeneTranscriptPositionBiotype
ENSMUSG00000025854 (Fam20c)
family with sequence similarity 20, member C 		ENSMUST00000026972 (Fam20c-001) 138754514-138810077 protein_coding
ENSMUST00000159176 (Fam20c-003) 138786500-138809159 processed_transcript
ENSMUST00000160645 (Fam20c-002) 138755083-138809381 nonsense_mediated_decay
ENSMUST00000160988 (Fam20c-004) 138788774-138807339 processed_transcript
ENSMUST00000161641 (Fam20c-005) 138807190-138809405 retained_intron
ENSMUSG00000094504 (Gm5294)
predicted gene 5294 		ENSMUST00000179205 (Gm5294-201) 138820080-138821619 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004MR_0001ENSDARG00000086055ENSDART00000123315ENSDARG00000090338ENSDART00000130741CIL_0004MR_0002ENSMUSG00000025854ENSMUST00000026972ENSMUST00000159176ENSMUST00000160645ENSMUST00000160988ENSMUST00000161641ENSMUSG00000094504ENSMUST00000179205
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004MR_0001ENSDARG00000086055ENSDART00000123315ENSDARG00000090338ENSDART00000130741CIL_0004MR_0002ENSMUSG00000025854ENSMUST00000026972ENSMUST00000159176ENSMUST00000160645ENSMUSG00000094504ENSMUST00000179205
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000086055 ENSDART00000123315 N/A N/A N/A 0.190±0.05 N/A N/A 0.131±0.00 0.099±0.02 N/A N/A N/A N/A N/A N/A
ENSDARG00000090338 ENSDART00000130741 N/A N/A N/A 1.560±1.26 N/A N/A 0.942±0.40 0.507±0.00 1.597±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025854 ENSMUST00000026972 16.265±5.13 5.787±0.85 4.220±0.23 20.261±9.79 5.240±1.67 1.449±0.26 4.243±0.31 19.102±4.27 7.764±2.91 3.597±0.32 3.699±0.84 12.448±5.65 4.652±2.86 0.256±0.11
ENSMUST00000159176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.935±0.00 N/A 0.136±0.00
ENSMUST00000160645 N/A 6.304±0.54 N/A 4.329±0.00 4.017±1.43 0.926±0.31 N/A 7.241±4.04 6.368±2.63 1.336±0.41 N/A 16.145±6.31 1.196±0.89 0.150±0.00
ENSMUST00000160988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000094504 ENSMUST00000179205 0.093±0.04 0.071±0.02 N/A 0.181±0.06 N/A N/A 0.054±0.00 0.091±0.03 0.100±0.07 N/A 0.147±0.02 3.231±2.24 N/A 1.129±0.45

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