C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: low density lipoprotein receptor-related protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000253193 LRP3-001 ENSG00000130881 9606 + 19:33194584-33208867 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000253193
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000253193 7.332±0.00 8.009±0.00 10.373±6.00 22.594±0.00 5.013±4.89 3.402±2.85 3.616±1.84 5.921±4.88 1.224±1.11 3.160±1.08 15.208±13.65 4.889±0.89 6.256±4.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004NJ CIL_0004NJ_0002 CGP 19:33177603-33225850

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005905 IEA coated pit
GO:0006898 TAS receptor-mediated endocytosis
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118444 Lrp3-003 protein_coding Mus_musculus 0 2623
ENSMUST00000122409 Lrp3-001 protein_coding Mus_musculus 0 2475
ENSMUST00000155404 Lrp3-004 retained_intron Mus_musculus 0 732

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