C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 40
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165398 Arhgap40-201 ENSMUSG00000074625 10090 + 2:158512796-158550628 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000165398
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000165398 0.043±0.00 0.022±0.00 3.928±0.00 1.417±0.20 0.032±0.01 0.026±0.01 0.051±0.01 0.009±0.00 0.629±0.36 0.016±0.00 0.372±0.18 0.171±0.11 0.241±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081Y CIL_00081Y_0002 VISTA 2:158139041-158740388
CIL_0004O3 CIL_0004O3_0002 CGP 2:158502612-158550762
CIL_0004NT CIL_0004NT_0002 CGP 2:158512796-158615748

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005096 IEA GTPase activator activity
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction
GO:0008150 ND biological_process
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000243967 ARHGAP40-001 protein_coding Homo_sapiens 0 1362
ENST00000373345 ARHGAP40-201 protein_coding Homo_sapiens 0 1482

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