C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004PC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000096668-ENSDARG00000042688 CGP 7955 1:29774503-29791053
GeneTranscriptPositionBiotype
ENSDARG00000042688 (bora)
bora, aurora kinase A activator 		ENSDART00000062628 (bora-001) 29779715-29791053 protein_coding
ENSDART00000127670 (bora-003) 29779718-29790620 protein_coding
ENSDART00000127943 (bora-002) 29779637-29784264 protein_coding
ENSDART00000143897 (bora-004) 29779637-29783876 retained_intron
ENSDARG00000096668 (MZT1)
mitotic spindle organizing protein 1 		ENSDART00000152150 (MZT1-002) 29776074-29779515 protein_coding
ENSDART00000152175 (MZT1-001) 29774503-29779498 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0004PC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000204899-ENSG00000136122 CGP 9606 13:72708357-72756198
GeneTranscriptPositionBiotype
ENSG00000083520 (DIS3)
DIS3 exosome endoribonuclease and 3'-5' exoribonuclease 		ENST00000377767 (DIS3-001) 72752169-72781933 protein_coding
ENST00000377780 (DIS3-002) 72757443-72781925 protein_coding
ENST00000475871 (DIS3-004) 72780846-72782094 processed_transcript
ENST00000490646 (DIS3-003) 72759675-72781854 nonsense_mediated_decay
ENST00000545453 (DIS3-201) 72759044-72782096 protein_coding
ENSG00000204899 (MZT1)
mitotic spindle organizing protein 1 		ENST00000377818 (MZT1-001) 72708357-72727687 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0004PC_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033186-ENSMUSG00000022070 CGP 10090 14:99034544-99074537
GeneTranscriptPositionBiotype
ENSMUSG00000022070 (Bora)
bora, aurora kinase A activator 		ENSMUST00000022656 (Bora-201) 99046427-99074537 protein_coding
ENSMUSG00000033186 (Mzt1)
mitotic spindle organizing protein 1 		ENSMUST00000042662 (Mzt1-201) 99034544-99046136 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004PC_0001ENSDARG00000042688ENSDART00000062628ENSDART00000127670ENSDART00000127943ENSDART00000143897ENSDARG00000096668ENSDART00000152150ENSDART00000152175CIL_0004PC_0002ENSG00000083520ENST00000377767ENST00000377780ENST00000475871ENST00000490646ENST00000545453ENSG00000204899ENST00000377818CIL_0004PC_0003ENSMUSG00000022070ENSMUST00000022656ENSMUSG00000033186ENSMUST00000042662
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004PC_0001ENSDARG00000042688ENSDART00000062628ENSDART00000127670ENSDART00000127943ENSDART00000143897ENSDARG00000096668ENSDART00000152150ENSDART00000152175CIL_0004PC_0002ENSG00000083520ENST00000377767ENST00000377780ENST00000490646ENST00000545453ENSG00000204899ENST00000377818CIL_0004PC_0003ENSMUSG00000022070ENSMUST00000022656ENSMUSG00000033186ENSMUST00000042662
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000042688 ENSDART00000062628 N/A N/A N/A 0.104±0.01 N/A N/A 0.188±0.04 4.459±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000127670 N/A N/A N/A 0.440±0.11 N/A N/A 0.136±0.00 5.855±0.00 0.527±0.00 N/A 0.033±0.00 N/A N/A N/A
ENSDART00000127943 N/A N/A N/A 0.259±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143897 N/A N/A N/A 0.058±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000096668 ENSDART00000152150 N/A N/A N/A 5.731±3.90 N/A N/A 1.720±1.11 1.935±0.00 0.595±0.00 N/A 0.859±0.00 N/A N/A N/A
ENSDART00000152175 N/A N/A N/A 10.759±9.39 N/A N/A 4.814±3.70 5.648±2.43 0.486±0.00 N/A 3.652±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000083520 ENST00000377767 0.992±0.00 0.890±0.00 0.709±0.00 0.699±0.23 1.112±0.16 0.842±0.23 0.428±0.11 0.943±0.41 0.792±0.00 0.652±0.01 0.282±0.00 1.699±0.73 0.726±0.18 1.402±0.00
ENST00000377780 1.572±0.00 2.575±0.00 N/A 1.517±0.34 1.751±0.00 1.098±0.00 1.004±0.49 2.088±0.90 1.845±0.69 2.719±0.40 0.586±0.11 3.159±1.38 2.019±1.14 5.427±1.42
ENST00000475871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490646 N/A N/A 1.722±0.00 1.721±0.00 N/A 2.357±1.09 1.111±0.00 N/A 2.231±0.00 2.117±0.00 0.472±0.00 7.250±0.00 4.013±0.00 9.854±0.00
ENST00000545453 2.642±0.00 2.584±0.00 N/A 1.670±0.00 2.639±0.00 1.399±0.00 1.880±0.00 2.173±0.00 N/A 3.373±0.00 2.217±0.00 2.878±0.00 1.196±0.02 8.534±2.61
ENSG00000204899 ENST00000377818 2.887±0.00 3.184±0.00 0.596±0.00 8.026±1.31 2.375±0.62 2.454±0.45 1.868±0.73 1.853±1.79 1.624±0.72 2.472±0.14 1.985±1.01 5.895±4.31 3.931±1.94 4.062±0.15
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022070 ENSMUST00000022656 0.803±0.71 0.992±0.34 2.583±0.58 5.601±0.23 0.725±0.31 1.414±0.48 0.239±0.11 0.327±0.18 6.535±7.06 0.414±0.12 0.328±0.17 2.289±1.01 4.827±2.30 4.193±1.98
ENSMUSG00000033186 ENSMUST00000042662 7.908±1.43 11.022±1.54 11.177±1.37 24.436±12.56 6.205±1.59 6.433±1.33 10.717±1.04 8.208±1.57 13.295±9.46 8.762±1.00 15.295±3.20 6.212±1.94 7.697±4.43 4.610±1.73

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