C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DIS3 exosome endoribonuclease and 3'-5' exoribonuclease
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000490646 DIS3-003 ENSG00000083520 9606 - 13:72759675-72781854 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000490646
Transcript ID Bladder Brain Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000490646 1.722±0.00 1.721±0.00 2.357±1.09 1.111±0.00 2.231±0.00 2.117±0.00 0.472±0.00 7.250±0.00 4.013±0.00 9.854±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095B CIL_00095B_0001 VISTA 13:72193463-72794242
CIL_000955 CIL_000955_0001 VISTA 13:72204429-72805745
CIL_0009CH CIL_0009CH_0001 VISTA 13:72207309-72809616
CIL_0009CG CIL_0009CG_0001 VISTA 13:72212874-72814683
CIL_000956 CIL_000956_0001 VISTA 13:72274916-72875890
CIL_0009CJ CIL_0009CJ_0001 VISTA 13:72350262-72951768
CIL_0004PC CIL_0004PC_0002 CGP 13:72708357-72756198
CIL_0005KC CIL_0005KC_0002 CGP 13:72727749-72782096
CIL_0002NH CIL_0002NH_0001 CGP 13:72752169-73016461

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042471 Dis3-201 protein_coding Mus_musculus 0 1877
ENSMUST00000022650 Pibf1-201 protein_coding Mus_musculus 0 265

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