C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004PM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000213949-ENSG00000213949 CGP 9606 5:52787896-52959210
GeneTranscriptPositionBiotype
ENSG00000152684 (PELO)
pelota homolog (Drosophila) 		ENST00000274311 (PELO-001) 52787940-52804046 protein_coding
ENST00000506949 (PELO-002) 52787953-52801834 processed_transcript
ENSG00000213949 (ITGA1)
integrin, alpha 1 		ENST00000282588 (ITGA1-001) 52787896-52959210 protein_coding
ENST00000504086 (ITGA1-002) 52787947-52825210 processed_transcript
ENST00000504669 (ITGA1-003) 52901779-52952512 retained_intron
ENST00000506275 (ITGA1-004) 52931152-52956491 retained_intron
ENST00000509049 (ITGA1-007) 52864971-52882927 processed_transcript
ENST00000513737 (ITGA1-005) 52863973-52887891 processed_transcript
ENST00000514262 (ITGA1-006) 52863973-52867218 processed_transcript
ENSG00000251237 (CTD-2207L17.2)
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 pseudogene 1 		ENST00000509174 (CTD-2207L17.2-001) 52889666-52889954 processed_pseudogene
CIL_0004PM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042284-ENSMUSG00000042284 CGP 10090 13:114958079-115101964
GeneTranscriptPositionBiotype
ENSMUSG00000042275 (Pelo)
pelota homolog (Drosophila) 		ENSMUST00000109226 (Pelo-201) 115088357-115090188 protein_coding
ENSMUSG00000042284 (Itga1)
integrin alpha 1 		ENSMUST00000061673 (Itga1-201) 114958079-115101964 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004PM_0001ENSG00000152684ENST00000274311ENST00000506949ENSG00000213949ENST00000282588ENST00000504086ENST00000504669ENST00000506275ENST00000509049ENST00000513737ENST00000514262ENSG00000251237ENST00000509174CIL_0004PM_0002ENSMUSG00000042275ENSMUST00000109226ENSMUSG00000042284ENSMUST00000061673
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004PM_0001ENSG00000152684ENST00000274311ENST00000506949ENSG00000213949ENST00000282588ENST00000504669ENST00000506275ENSG00000251237ENST00000509174CIL_0004PM_0002ENSMUSG00000042275ENSMUST00000109226ENSMUSG00000042284ENSMUST00000061673
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000152684 ENST00000274311 N/A N/A N/A 2.172±0.00 N/A N/A 1.872±0.00 5.675±0.00 N/A N/A 1.837±0.00 2.287±0.44 6.664±0.00 1.974±0.00
ENST00000506949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.774±0.84 12.927±0.00 N/A 10.998±0.00
ENSG00000213949 ENST00000282588 18.734±0.00 4.327±0.00 1.877±0.00 0.713±0.40 11.733±0.70 13.076±5.39 3.896±2.12 12.067±0.27 9.069±1.78 4.403±0.57 0.569±0.00 2.324±0.89 10.234±3.48 3.044±2.62
ENST00000504086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504669 N/A N/A 3.184±0.00 0.274±0.00 6.088±0.00 5.649±0.00 1.321±0.00 3.815±0.00 6.859±0.00 4.551±0.00 N/A 2.212±0.00 N/A N/A
ENST00000506275 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.828±0.00 N/A 1.416±0.60 N/A N/A
ENST00000509049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513737 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000251237 ENST00000509174 N/A N/A 0.393±0.00 N/A N/A N/A N/A 0.048±0.00 N/A N/A N/A N/A 0.188±0.06 0.045±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042275 ENSMUST00000109226 12.118±1.09 9.060±1.81 19.032±3.12 9.854±2.94 6.728±2.47 11.554±2.26 6.907±0.85 14.463±0.17 13.836±5.56 15.002±0.63 6.282±0.42 12.313±1.81 19.697±4.26 7.310±2.41
ENSMUSG00000042284 ENSMUST00000061673 6.903±1.92 3.632±0.78 N/A 0.635±0.17 4.182±0.70 4.758±1.84 3.140±0.39 9.426±1.49 1.772±0.59 21.247±2.70 0.568±0.00 4.104±1.52 3.102±1.68 2.070±1.54

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