C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004QI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000204889-ENSG00000212899 CGP 9606 17:40977716-40994133
GeneTranscriptPositionBiotype
ENSG00000204889 (KRT40)
keratin 40 		ENST00000377755 (KRT40-201) 40977716-40984308 protein_coding
ENST00000398486 (KRT40-002) 40977882-40987135 protein_coding
ENST00000461923 (KRT40-001) 40977716-40987001 nonsense_mediated_decay
ENSG00000212899 (KRTAP3-3)
keratin associated protein 3-3 		ENST00000391586 (KRTAP3-3-001) 40993430-40994133 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0004QI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000059169-ENSMUSG00000069722 CGP 10090 11:99537485-99550865
GeneTranscriptPositionBiotype
ENSMUSG00000059169 (Krt40)
keratin 40 		ENSMUST00000074253 (Krt40-001) 99537485-99543158 protein_coding
ENSMUST00000107443 (Krt40-002) 99537485-99543158 protein_coding
ENSMUSG00000069722 (Krtap3-3)
keratin associated protein 3-3 		ENSMUST00000092700 (Krtap3-3-001) 99550130-99550865 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLungMuscleOvaryTestisCIL_0004QI_0001ENSG00000204889ENST00000377755ENST00000398486ENST00000461923ENSG00000212899ENST00000391586CIL_0004QI_0002ENSMUSG00000059169ENSMUST00000074253ENSMUST00000107443ENSMUSG00000069722ENSMUST00000092700
Region; Gene Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLungMuscleOvaryTestisCIL_0004QI_0001ENSG00000204889ENST00000377755ENST00000398486ENSG00000212899ENST00000391586CIL_0004QI_0002ENSMUSG00000059169ENSMUST00000074253ENSMUST00000107443ENSMUSG00000069722ENSMUST00000092700
Gene Transcript Adipose Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENSG00000204889 ENST00000377755 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A
ENST00000398486 N/A N/A 0.098±0.00 N/A 0.067±0.00 N/A 0.031±0.00 0.242±0.00 N/A 0.092±0.00 0.182±0.00
ENST00000461923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000212899 ENST00000391586 N/A N/A N/A N/A N/A 0.188±0.00 N/A N/A N/A N/A 0.075±0.00
Gene Transcript Adipose Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENSMUSG00000059169 ENSMUST00000074253 0.072±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.146±0.01
ENSMUST00000107443 N/A 0.008±0.00 N/A 0.034±0.00 N/A N/A N/A N/A N/A 0.108±0.00 0.095±0.06
ENSMUSG00000069722 ENSMUST00000092700 N/A 0.007±0.00 N/A N/A 0.057±0.00 N/A N/A 0.162±0.02 0.733±0.00 N/A N/A

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