C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004S1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140854-ENSG00000140859 CGP 9606 16:57735730-57863053
GeneTranscriptPositionBiotype
ENSG00000140854 (KATNB1)
katanin p80 (WD repeat containing) subunit B 1 		ENST00000379661 (KATNB1-001) 57735730-57757250 protein_coding
ENST00000562542 (KATNB1-007) 57755448-57756884 retained_intron
ENST00000562592 (KATNB1-003) 57735739-57752055 protein_coding
ENST00000563127 (KATNB1-006) 57737192-57752104 retained_intron
ENST00000563462 (KATNB1-008) 57753457-57756868 protein_coding
ENST00000566611 (KATNB1-002) 57735864-57756885 retained_intron
ENST00000566726 (KATNB1-010) 57735791-57752036 protein_coding
ENST00000566785 (KATNB1-004) 57736763-57744459 protein_coding
ENST00000569018 (KATNB1-009) 57755146-57756895 retained_intron
ENST00000569627 (KATNB1-005) 57736973-57751660 protein_coding
ENSG00000140859 (KIFC3)
kinesin family member C3 		ENST00000379655 (KIFC3-001) 57758217-57802588 protein_coding
ENST00000421376 (KIFC3-010) 57758428-57798017 protein_coding
ENST00000445690 (KIFC3-003) 57758219-57802513 protein_coding
ENST00000465878 (KIFC3-002) 57758217-57797764 protein_coding
ENST00000540079 (KIFC3-007) 57758459-57775119 protein_coding
ENST00000541240 (KIFC3-009) 57758445-57803023 protein_coding
ENST00000543930 (KIFC3-004) 57758532-57782297 protein_coding
ENST00000561524 (KIFC3-034) 57771630-57797812 protein_coding
ENST00000562311 (KIFC3-026) 57771336-57802494 protein_coding
ENST00000562503 (KIFC3-033) 57771286-57798100 protein_coding
ENST00000562903 (KIFC3-006) 57758720-57782309 protein_coding
ENST00000562984 (KIFC3-028) 57771368-57803253 protein_coding
ENST00000563028 (KIFC3-014) 57794997-57863053 protein_coding
ENST00000563266 (KIFC3-019) 57762195-57765845 processed_transcript
ENST00000563295 (KIFC3-024) 57779890-57782369 processed_transcript
ENST00000564136 (KIFC3-005) 57758738-57782313 nonsense_mediated_decay
ENST00000564204 (KIFC3-015) 57773808-57775076 retained_intron
ENST00000564891 (KIFC3-031) 57794999-57803253 protein_coding
ENST00000565270 (KIFC3-018) 57759753-57764389 protein_coding
ENST00000565351 (KIFC3-011) 57771636-57779540 protein_coding
ENST00000565397 (KIFC3-017) 57758320-57760945 protein_coding
ENST00000565481 (KIFC3-027) 57770607-57802934 protein_coding
ENST00000565684 (KIFC3-013) 57771671-57846535 protein_coding
ENST00000565753 (KIFC3-016) 57759438-57761261 retained_intron
ENST00000565871 (KIFC3-036) 57795063-57803247 processed_transcript
ENST00000566648 (KIFC3-030) 57771580-57803422 protein_coding
ENST00000566914 (KIFC3-035) 57785398-57802470 retained_intron
ENST00000566975 (KIFC3-032) 57771661-57797912 processed_transcript
ENST00000567059 (KIFC3-021) 57788598-57803024 protein_coding
ENST00000567204 (KIFC3-029) 57771560-57803295 processed_transcript
ENST00000567479 (KIFC3-022) 57776622-57782303 processed_transcript
ENST00000569112 (KIFC3-025) 57771365-57802449 protein_coding
ENST00000569222 (KIFC3-020) 57771324-57775119 protein_coding
ENST00000569619 (KIFC3-023) 57771636-57782329 protein_coding
ENST00000623271 (KIFC3-008) 57774709-57777101 TEC
ENSG00000274816 (MIR6772)
microRNA 6772 		ENST00000616699 (MIR6772-201) 57772289-57772352 miRNA
CIL_0004S1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031787-ENSMUSG00000031788 CGP 10090 8:95081201-95142540
GeneTranscriptPositionBiotype
ENSMUSG00000031787 (Katnb1)
katanin p80 (WD40-containing) subunit B 1 		ENSMUST00000034239 (Katnb1-201) 95081201-95099874 protein_coding
ENSMUSG00000031788 (Kifc3)
kinesin family member C3 		ENSMUST00000034240 (Kifc3-201) 95099832-95142540 protein_coding
ENSMUST00000169353 (Kifc3-202) 95099832-95113342 protein_coding
ENSMUST00000169748 (Kifc3-203) 95099832-95142540 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004S1_0001ENSG00000140854ENST00000379661ENST00000562542ENST00000562592ENST00000563127ENST00000563462ENST00000566726ENST00000566785ENST00000569627ENSG00000140859ENST00000379655ENST00000421376ENST00000445690ENST00000465878ENST00000540079ENST00000541240ENST00000543930ENST00000562311ENST00000562503ENST00000563266ENST00000565270ENST00000565397ENST00000565481ENST00000623271ENSG00000274816ENST00000616699CIL_0004S1_0002ENSMUSG00000031787ENSMUST00000034239ENSMUSG00000031788ENSMUST00000034240ENSMUST00000169353ENSMUST00000169748
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140854 ENST00000379661 6.326±0.00 7.103±0.00 0.905±0.00 9.963±5.67 4.004±3.49 3.101±0.00 1.307±0.86 2.415±2.04 2.297±0.00 3.686±2.92 3.304±0.00 7.853±3.37 8.702±1.83 23.000±0.00
ENST00000562542 N/A N/A N/A N/A N/A N/A N/A N/A 0.577±0.00 N/A N/A N/A N/A N/A
ENST00000562592 N/A N/A N/A N/A N/A 0.463±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563127 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.691±0.00 N/A N/A N/A N/A
ENST00000563462 N/A N/A N/A N/A N/A 3.024±0.00 0.922±0.00 1.800±0.00 1.326±0.00 N/A N/A 11.124±0.00 4.470±1.43 37.734±0.00
ENST00000566611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566726 N/A N/A N/A N/A 1.028±0.00 N/A N/A N/A 1.039±0.00 N/A N/A N/A N/A N/A
ENST00000566785 N/A N/A N/A N/A 1.987±0.00 N/A N/A N/A 0.684±0.00 N/A N/A N/A N/A N/A
ENST00000569018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569627 N/A N/A 1.194±0.00 9.666±0.00 N/A N/A N/A 0.966±0.00 N/A N/A 2.068±0.00 N/A N/A N/A
ENSG00000140859 ENST00000379655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.294±1.41
ENST00000421376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.834±0.56 N/A
ENST00000445690 8.123±0.00 9.485±0.00 N/A 4.340±0.00 5.995±0.00 3.126±0.00 6.631±0.00 19.000±0.00 2.966±0.00 16.821±0.00 1.652±0.00 12.405±9.06 7.024±2.34 N/A
ENST00000465878 3.308±0.00 N/A N/A N/A N/A N/A N/A N/A 1.454±0.00 0.422±0.00 N/A 3.808±0.00 3.563±1.24 N/A
ENST00000540079 N/A N/A 1.246±0.00 N/A N/A N/A 0.375±0.00 N/A 1.879±0.00 N/A N/A 3.357±0.74 N/A 22.666±12.15
ENST00000541240 8.689±0.00 10.108±0.00 N/A 4.067±0.00 8.130±0.00 3.310±0.00 4.207±4.04 13.228±0.00 N/A 7.091±0.00 0.472±0.00 N/A N/A N/A
ENST00000543930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.178±0.00
ENST00000561524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562311 N/A N/A N/A N/A N/A N/A N/A 0.753±0.00 N/A N/A N/A N/A N/A N/A
ENST00000562503 N/A N/A 3.308±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563266 N/A N/A N/A N/A N/A N/A N/A N/A 2.350±0.00 N/A N/A N/A N/A N/A
ENST00000563295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.038±0.00 N/A N/A N/A
ENST00000565351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565397 N/A N/A N/A N/A N/A N/A N/A N/A 5.166±0.00 N/A N/A N/A N/A N/A
ENST00000565481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.185±0.00 N/A N/A
ENST00000565684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000623271 N/A N/A 1.951±0.00 N/A N/A N/A 0.219±0.00 0.435±0.00 0.351±0.00 1.280±0.00 N/A N/A N/A N/A
ENSG00000274816 ENST00000616699 N/A 2.216±0.00 N/A N/A N/A N/A N/A N/A 3.576±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031787 ENSMUST00000034239 8.248±0.90 10.380±0.71 5.452±0.81 10.621±1.34 6.876±2.79 10.972±1.65 3.543±0.49 10.014±0.91 3.237±2.43 9.389±0.94 2.335±0.51 13.787±5.21 6.472±1.56 66.046±26.36
ENSMUSG00000031788 ENSMUST00000034240 5.480±1.36 36.565±11.00 10.686±1.25 12.364±5.77 6.216±3.20 6.056±1.96 10.420±0.43 13.545±6.00 1.941±0.62 21.166±2.47 2.338±0.48 12.372±2.87 5.830±1.90 N/A
ENSMUST00000169353 4.986±0.00 18.194±4.13 N/A N/A 3.769±1.49 4.454±0.88 6.990±1.21 11.862±2.95 2.955±0.83 4.550±0.00 N/A 9.972±1.90 4.190±1.36 28.011±6.80
ENSMUST00000169748 N/A 10.365±0.00 3.004±0.00 5.228±0.00 N/A N/A 3.416±0.42 5.644±0.20 1.204±0.19 4.280±0.00 0.814±0.00 3.913±0.28 4.508±1.36 N/A

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