C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kinesin family member C3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169748 Kifc3-203 ENSMUSG00000031788 10090 - 8:95099832-95142540 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000169748
Transcript ID Adrenal Bladder Brain Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000169748 10.365±0.00 3.004±0.00 5.228±0.00 3.416±0.42 5.644±0.20 1.204±0.19 4.280±0.00 0.814±0.00 3.913±0.28 4.508±1.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004S2 CIL_0004S2_0002 CGP 8:95055103-95099874
CIL_0004S1 CIL_0004S1_0002 CGP 8:95081201-95142540
CIL_0004S0 CIL_0004S0_0002 CGP 8:95099832-95306585

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003777 IBA microtubule motor activity
GO:0005524 IEA ATP binding
GO:0005794 IDA Golgi apparatus
GO:0005871 IDA kinesin complex
GO:0005874 IEA microtubule
GO:0006200 IBA ATP catabolic process
GO:0007017 IDA microtubule-based process
GO:0007018 IBA microtubule-based movement
GO:0007030 IMP Golgi organization
GO:0008017 IEA microtubule binding
GO:0008152 IBA metabolic process
GO:0008569 TAS minus-end-directed microtubule motor activity
GO:0016887 IBA ATPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379655 KIFC3-001 protein_coding Homo_sapiens 0 1397
ENST00000421376 KIFC3-010 protein_coding Homo_sapiens 0 1397
ENST00000445690 KIFC3-003 protein_coding Homo_sapiens 0 1397
ENST00000465878 KIFC3-002 protein_coding Homo_sapiens 0 1397
ENST00000540079 KIFC3-007 protein_coding Homo_sapiens 0 1397
ENST00000541240 KIFC3-009 protein_coding Homo_sapiens 0 1397
ENST00000543930 KIFC3-004 protein_coding Homo_sapiens 0 2564
ENST00000561524 KIFC3-034 protein_coding Homo_sapiens 0 250
ENST00000562311 KIFC3-026 protein_coding Homo_sapiens 0 405
ENST00000562503 KIFC3-033 protein_coding Homo_sapiens 0 496
ENST00000562903 KIFC3-006 protein_coding Homo_sapiens 0 1397
ENST00000562984 KIFC3-028 protein_coding Homo_sapiens 0 279
ENST00000563266 KIFC3-019 processed_transcript Homo_sapiens 0 235
ENST00000564136 KIFC3-005 nonsense_mediated_decay Homo_sapiens 0 1397
ENST00000565270 KIFC3-018 protein_coding Homo_sapiens 0 1179
ENST00000565351 KIFC3-011 protein_coding Homo_sapiens 6e-30 134
ENST00000565481 KIFC3-027 protein_coding Homo_sapiens 0 634
ENST00000565684 KIFC3-013 protein_coding Homo_sapiens 6e-18 95
ENST00000566648 KIFC3-030 protein_coding Homo_sapiens 5.04467e-44 182
ENST00000566975 KIFC3-032 processed_transcript Homo_sapiens 3e-21 106
ENST00000567204 KIFC3-029 processed_transcript Homo_sapiens 4.06377e-44 182
ENST00000569112 KIFC3-025 protein_coding Homo_sapiens 0 281
ENST00000569222 KIFC3-020 protein_coding Homo_sapiens 0 233
ENST00000569619 KIFC3-023 protein_coding Homo_sapiens 2e-29 134

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