C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004S2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000159625-ENSG00000140854 CGP 9606 16:57694793-57757250
GeneTranscriptPositionBiotype
ENSG00000140854 (KATNB1)
katanin p80 (WD repeat containing) subunit B 1 		ENST00000379661 (KATNB1-001) 57735730-57757250 protein_coding
ENST00000562542 (KATNB1-007) 57755448-57756884 retained_intron
ENST00000562592 (KATNB1-003) 57735739-57752055 protein_coding
ENST00000563127 (KATNB1-006) 57737192-57752104 retained_intron
ENST00000563462 (KATNB1-008) 57753457-57756868 protein_coding
ENST00000566611 (KATNB1-002) 57735864-57756885 retained_intron
ENST00000566726 (KATNB1-010) 57735791-57752036 protein_coding
ENST00000566785 (KATNB1-004) 57736763-57744459 protein_coding
ENST00000569018 (KATNB1-009) 57755146-57756895 retained_intron
ENST00000569627 (KATNB1-005) 57736973-57751660 protein_coding
ENSG00000159625 (CCDC135)
dynein regulatory complex subunit 7 		ENST00000336825 (CCDC135-003) 57694836-57731454 protein_coding
ENST00000360716 (CCDC135-002) 57694800-57731453 protein_coding
ENST00000394337 (CCDC135-001) 57694806-57731455 protein_coding
ENST00000562250 (CCDC135-004) 57721692-57731805 protein_coding
ENST00000563126 (CCDC135-009) 57694811-57700267 protein_coding
ENST00000564132 (CCDC135-010) 57704907-57707861 protein_coding
ENST00000564297 (CCDC135-007) 57694817-57702032 nonsense_mediated_decay
ENST00000565609 (CCDC135-005) 57725474-57731453 retained_intron
ENST00000569167 (CCDC135-008) 57694801-57702001 protein_coding
ENST00000569375 (CCDC135-006) 57694793-57698928 protein_coding
ENSG00000260438 (RP11-405F3.2)
 ENST00000562099 (RP11-405F3.2-001) 57713782-57714957 processed_pseudogene
ENSG00000260467 (RP11-405F3.4)
 ENST00000563062 (RP11-405F3.4-001) 57681124-57701730 antisense
CIL_0004S2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031786-ENSMUSG00000031787 CGP 10090 8:95055103-95099874
GeneTranscriptPositionBiotype
ENSMUSG00000031786 (Ccdc135)
dynein regulatory complex subunit 7 		ENSMUST00000058479 (Ccdc135-201) 95055103-95078141 protein_coding
ENSMUSG00000031787 (Katnb1)
katanin p80 (WD40-containing) subunit B 1 		ENSMUST00000034239 (Katnb1-201) 95081201-95099874 protein_coding
ENSMUSG00000031788 (Kifc3)
kinesin family member C3 		ENSMUST00000034240 (Kifc3-201) 95099832-95142540 protein_coding
ENSMUST00000169353 (Kifc3-202) 95099832-95113342 protein_coding
ENSMUST00000169748 (Kifc3-203) 95099832-95142540 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004S2_0001ENSG00000140854ENST00000379661ENST00000562542ENST00000562592ENST00000563127ENST00000563462ENST00000566611ENST00000566726ENST00000566785ENST00000569018ENST00000569627ENSG00000159625ENST00000336825ENST00000360716ENST00000394337ENST00000562250ENST00000563126ENST00000564132ENST00000564297ENST00000565609ENST00000569167ENST00000569375ENSG00000260438ENST00000562099ENSG00000260467ENST00000563062CIL_0004S2_0002ENSMUSG00000031786ENSMUST00000058479ENSMUSG00000031787ENSMUST00000034239ENSMUSG00000031788ENSMUST00000034240ENSMUST00000169353ENSMUST00000169748
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004S2_0001ENSG00000140854ENST00000379661ENST00000562542ENST00000562592ENST00000563127ENST00000563462ENST00000566726ENST00000566785ENST00000569627ENSG00000159625ENST00000336825ENST00000360716ENST00000394337ENST00000562250ENST00000564132ENST00000569167ENSG00000260438ENST00000562099ENSG00000260467ENST00000563062CIL_0004S2_0002ENSMUSG00000031786ENSMUST00000058479ENSMUSG00000031787ENSMUST00000034239ENSMUSG00000031788ENSMUST00000034240ENSMUST00000169353ENSMUST00000169748
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140854 ENST00000379661 6.326±0.00 7.103±0.00 0.905±0.00 9.963±5.67 4.004±3.49 3.101±0.00 1.307±0.86 2.415±2.04 2.297±0.00 3.686±2.92 3.304±0.00 7.853±3.37 8.702±1.83 23.000±0.00
ENST00000562542 N/A N/A N/A N/A N/A N/A N/A N/A 0.577±0.00 N/A N/A N/A N/A N/A
ENST00000562592 N/A N/A N/A N/A N/A 0.463±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563127 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.691±0.00 N/A N/A N/A N/A
ENST00000563462 N/A N/A N/A N/A N/A 3.024±0.00 0.922±0.00 1.800±0.00 1.326±0.00 N/A N/A 11.124±0.00 4.470±1.43 37.734±0.00
ENST00000566611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566726 N/A N/A N/A N/A 1.028±0.00 N/A N/A N/A 1.039±0.00 N/A N/A N/A N/A N/A
ENST00000566785 N/A N/A N/A N/A 1.987±0.00 N/A N/A N/A 0.684±0.00 N/A N/A N/A N/A N/A
ENST00000569018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569627 N/A N/A 1.194±0.00 9.666±0.00 N/A N/A N/A 0.966±0.00 N/A N/A 2.068±0.00 N/A N/A N/A
ENSG00000159625 ENST00000336825 N/A N/A N/A 0.060±0.00 N/A N/A N/A 0.188±0.16 N/A 1.618±1.33 N/A 0.076±0.00 0.074±0.00 21.338±0.00
ENST00000360716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.919±0.00 N/A 13.205±0.00
ENST00000394337 N/A N/A N/A 0.108±0.00 N/A N/A N/A N/A N/A N/A N/A 0.901±1.02 N/A N/A
ENST00000562250 N/A N/A 0.056±0.00 N/A 0.062±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564132 N/A N/A N/A 0.325±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569167 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.316±0.00 N/A N/A N/A N/A
ENST00000569375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260438 ENST00000562099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.364±0.00
ENSG00000260467 ENST00000563062 N/A N/A N/A N/A N/A N/A N/A N/A 0.178±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031786 ENSMUST00000058479 0.012±0.00 N/A 0.008±0.00 0.242±0.07 0.028±0.01 0.027±0.01 0.096±0.06 0.012±0.00 0.114±0.08 3.574±1.04 0.016±0.00 3.400±1.37 0.037±0.03 24.066±3.76
ENSMUSG00000031787 ENSMUST00000034239 8.248±0.90 10.380±0.71 5.452±0.81 10.621±1.34 6.876±2.79 10.972±1.65 3.543±0.49 10.014±0.91 3.237±2.43 9.389±0.94 2.335±0.51 13.787±5.21 6.472±1.56 66.046±26.36
ENSMUSG00000031788 ENSMUST00000034240 5.480±1.36 36.565±11.00 10.686±1.25 12.364±5.77 6.216±3.20 6.056±1.96 10.420±0.43 13.545±6.00 1.941±0.62 21.166±2.47 2.338±0.48 12.372±2.87 5.830±1.90 N/A
ENSMUST00000169353 4.986±0.00 18.194±4.13 N/A N/A 3.769±1.49 4.454±0.88 6.990±1.21 11.862±2.95 2.955±0.83 4.550±0.00 N/A 9.972±1.90 4.190±1.36 28.011±6.80
ENSMUST00000169748 N/A 10.365±0.00 3.004±0.00 5.228±0.00 N/A N/A 3.416±0.42 5.644±0.20 1.204±0.19 4.280±0.00 0.814±0.00 3.913±0.28 4.508±1.36 N/A

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