C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuronal calcium sensor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372398 NCS1-001 ENSG00000107130 9606 + 9:130172578-130237304 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372398
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372398 2.716±0.00 11.182±0.00 1.495±0.00 66.634±40.12 3.283±0.15 20.776±19.86 0.831±0.66 8.258±8.04 5.847±4.90 3.358±3.17 0.919±0.77 6.018±6.75 1.237±0.35 6.514±4.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XI CIL_0004XI_0001 CGP 9:130053426-130237304
CIL_0004XH CIL_0004XH_0001 CGP 9:130172578-130434123

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0005245 ISS voltage-gated calcium channel activity
GO:0005509 TAS:IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005829 IEA cytosol
GO:0005886 IDA plasma membrane
GO:0010975 ISS regulation of neuron projection development
GO:0019901 IEA protein kinase binding
GO:0030054 IEA cell junction
GO:0030424 IEA axon
GO:0030425 IEA dendrite
GO:0031045 IEA dense core granule
GO:0031410 IEA cytoplasmic vesicle
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0045211 IEA postsynaptic membrane
GO:0045921 IEA positive regulation of exocytosis
GO:0048015 IEA phosphatidylinositol-mediated signaling
GO:0070062 IDA extracellular vesicular exosome
GO:0070588 ISS calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000199 Ncs1-001 protein_coding Mus_musculus 0 1085
ENSMUST00000150670 Ncs1-002 processed_transcript Mus_musculus 0 523

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