C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004XJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000088898-ENSDARG00000062987 CGP 7955 15:15583707-15891615
GeneTranscriptPositionBiotype
ENSDARG00000062987 (tyw1)
tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) 		ENSDART00000142870 (tyw1-001) 15758175-15891615 protein_coding
ENSDART00000152633 (tyw1-002) 15813126-15891615 nonsense_mediated_decay
ENSDARG00000088898 (CALN1 (2 of 2))
calneuron 1 		ENSDART00000126185 (CALN1 (2 of 2)-201) 15584813-15720908 protein_coding
ENSDART00000155163 (CALN1 (2 of 2)-001) 15583707-15723432 protein_coding
ENSDARG00000096845 (si:dkey-148c4.3)
si:dkey-148c4.3 		ENSDART00000157230 (si:dkey-148c4.3-001) 15716530-15716931 sense_intronic

Danio rerio Ensembl (Zv9)

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CIL_0004XJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000183166-ENSG00000277149 CGP 9606 7:71779491-72828198
GeneTranscriptPositionBiotype
ENSG00000183166 (CALN1)
calneuron 1 		ENST00000329008 (CALN1-004) 71779491-72336995 protein_coding
ENST00000395275 (CALN1-006) 71779491-72412373 protein_coding
ENST00000395276 (CALN1-005) 71779491-72447061 protein_coding
ENST00000405452 (CALN1-201) 71779492-71810495 protein_coding
ENST00000431984 (CALN1-007) 71787775-72447151 protein_coding
ENST00000446128 (CALN1-008) 72023657-72337751 protein_coding
ENSG00000235581 (GS1-111G14.1)
 ENST00000455206 (GS1-111G14.1-001) 71942259-71942468 processed_pseudogene
ENSG00000266569 (RN7SL377P)
RNA, 7SL, cytoplasmic 377, pseudogene 		ENST00000585039 (RN7SL377P-201) 72822894-72823171 misc_RNA
ENSG00000270555 (RP11-1394O16.1)
 ENST00000604263 (RP11-1394O16.1-001) 72768798-72769191 processed_pseudogene
ENSG00000277149 (TYW1B)
tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae) 		ENST00000610600 (TYW1B-002) 72728844-72828186 protein_coding
ENST00000612372 (TYW1B-003) 72558744-72828174 protein_coding
ENST00000620995 (TYW1B-001) 72574515-72828198 protein_coding

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004XJ_0001ENSDARG00000062987ENSDART00000142870ENSDART00000152633ENSDARG00000088898ENSDART00000126185ENSDART00000155163ENSDARG00000096845ENSDART00000157230CIL_0004XJ_0002ENSG00000183166ENST00000329008ENST00000395275ENST00000395276ENST00000405452ENST00000431984ENST00000446128ENSG00000235581ENST00000455206ENSG00000266569ENST00000585039ENSG00000270555ENST00000604263ENSG00000277149ENST00000610600ENST00000612372ENST00000620995
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004XJ_0001ENSDARG00000062987ENSDART00000142870ENSDARG00000088898ENSDART00000126185ENSDART00000155163ENSDARG00000096845ENSDART00000157230CIL_0004XJ_0002ENSG00000183166ENST00000329008ENST00000395275ENST00000395276ENST00000405452ENST00000431984ENST00000446128ENSG00000235581ENST00000455206ENSG00000266569ENST00000585039ENSG00000270555ENST00000604263ENSG00000277149ENST00000610600ENST00000612372ENST00000620995
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000062987 ENSDART00000142870 N/A N/A N/A 3.679±2.68 N/A N/A 6.740±2.44 12.610±0.00 2.180±0.00 N/A 5.428±0.00 N/A N/A N/A
ENSDART00000152633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000088898 ENSDART00000126185 N/A N/A N/A N/A N/A N/A 0.319±0.00 N/A 0.051±0.00 N/A N/A N/A N/A N/A
ENSDART00000155163 N/A N/A N/A 3.385±3.00 N/A N/A N/A 0.195±0.00 0.043±0.00 N/A 0.220±0.00 N/A N/A N/A
ENSDARG00000096845 ENSDART00000157230 N/A N/A N/A 0.945±0.22 N/A N/A N/A N/A 0.251±0.00 N/A 0.404±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000183166 ENST00000329008 N/A N/A N/A 4.821±0.18 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000395275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.588±0.27
ENST00000395276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.541±0.00
ENST00000405452 0.031±0.00 0.067±0.00 0.006±0.00 N/A 0.046±0.02 0.018±0.00 0.018±0.00 0.032±0.01 0.046±0.03 0.041±0.02 0.003±0.00 0.018±0.02 0.072±0.00 N/A
ENST00000431984 N/A N/A N/A N/A 0.373±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.849±2.07
ENST00000446128 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.003±0.00 N/A N/A N/A N/A
ENSG00000235581 ENST00000455206 N/A 0.159±0.00 N/A N/A 0.361±0.00 N/A N/A N/A N/A N/A 0.150±0.00 N/A N/A N/A
ENSG00000266569 ENST00000585039 0.631±0.00 0.859±0.00 N/A 0.324±0.00 0.499±0.00 0.283±0.00 0.057±0.00 0.248±0.00 0.113±0.00 N/A 3.273±0.00 0.074±0.00 N/A 0.550±0.00
ENSG00000270555 ENST00000604263 N/A 0.091±0.00 0.184±0.00 N/A N/A N/A N/A N/A 1.093±0.00 N/A N/A 0.861±0.00 N/A N/A
ENSG00000277149 ENST00000610600 N/A N/A N/A N/A 0.356±0.00 0.783±0.65 0.345±0.00 0.544±0.00 N/A N/A 0.254±0.00 0.349±0.14 0.191±0.00 N/A
ENST00000612372 0.031±0.00 N/A N/A 0.264±0.00 0.117±0.00 N/A 0.026±0.00 0.101±0.00 N/A 0.118±0.00 0.328±0.00 0.280±0.00 N/A N/A
ENST00000620995 0.080±0.00 0.504±0.00 N/A 0.203±0.06 0.316±0.14 0.085±0.00 0.095±0.03 0.193±0.00 0.486±0.43 0.317±0.13 0.280±0.17 0.706±0.45 0.499±0.25 0.694±0.39

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