C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calneuron 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000431984 CALN1-007 ENSG00000183166 9606 - 7:71787775-72447151 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastTestisENST00000431984
Transcript ID Breast Testis
ENST00000431984 0.373±0.00 3.849±2.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072U CIL_00072U_0002 CGP 7:71132169-72447151
CIL_0004XJ CIL_0004XJ_0002 CGP 7:71779491-72828198

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0032588 IDA trans-Golgi network membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111288 Caln1-001 protein_coding Mus_musculus 0 872
ENSMUST00000111287 Caln1-003 protein_coding Mus_musculus 0 870
ENSMUST00000086029 Caln1-002 protein_coding Mus_musculus 0 869
ENSDART00000101780 caln2-201 protein_coding Danio_rerio 0 472
ENSDART00000141149 caln2-001 protein_coding Danio_rerio 0 472
ENSMUST00000141131 Caln1-004 processed_transcript Mus_musculus 2.00386e-43 180

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