C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004XX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101342-ENSG00000101347 CGP 9606 20:36876121-36951843
GeneTranscriptPositionBiotype
ENSG00000101342 (TLDC2)
TBC/LysM-associated domain containing 2 		ENST00000217320 (TLDC2-003) 36876131-36894235 protein_coding
ENST00000436941 (TLDC2-001) 36887455-36894235 protein_coding
ENST00000602922 (TLDC2-004) 36876121-36889863 protein_coding
ENSG00000101347 (SAMHD1)
SAM domain and HD domain 1 		ENST00000262878 (SAMHD1-001) 36890229-36951843 protein_coding
ENST00000465985 (SAMHD1-002) 36897568-36905394 retained_intron
CIL_0004XX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074628-ENSMUSG00000027639 CGP 10090 2:157087055-157135265
GeneTranscriptPositionBiotype
ENSMUSG00000027639 (Samhd1)
SAM domain and HD domain, 1 		ENSMUST00000057725 (Samhd1-001) 157097533-157135265 protein_coding
ENSMUST00000088523 (Samhd1-201) 157101360-157135222 protein_coding
ENSMUST00000109549 (Samhd1-002) 157103345-157135206 protein_coding
ENSMUST00000123932 (Samhd1-003) 157099401-157135093 nonsense_mediated_decay
ENSMUST00000139149 (Samhd1-008) 157107512-157110040 retained_intron
ENSMUST00000139263 (Samhd1-005) 157099401-157135120 protein_coding
ENSMUST00000142508 (Samhd1-007) 157109124-157110611 retained_intron
ENSMUST00000149313 (Samhd1-004) 157119564-157134937 retained_intron
ENSMUST00000152866 (Samhd1-006) 157121847-157130057 retained_intron
ENSMUST00000160213 (Samhd1-009) 157101694-157110612 retained_intron
ENSMUSG00000074628 (Tldc2)
TBC/LysM associated domain containing 2 		ENSMUST00000099140 (Tldc2-001) 157088453-157096482 protein_coding
ENSMUST00000166140 (Tldc2-201) 157087055-157096481 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004XX_0001ENSG00000101342ENST00000217320ENST00000436941ENST00000602922ENSG00000101347ENST00000262878ENST00000465985CIL_0004XX_0002ENSMUSG00000027639ENSMUST00000057725ENSMUST00000088523ENSMUST00000109549ENSMUST00000123932ENSMUST00000139149ENSMUST00000139263ENSMUST00000142508ENSMUST00000149313ENSMUST00000152866ENSMUST00000160213ENSMUSG00000074628ENSMUST00000099140ENSMUST00000166140
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004XX_0001ENSG00000101342ENST00000217320ENSG00000101347ENST00000262878CIL_0004XX_0002ENSMUSG00000027639ENSMUST00000057725ENSMUST00000088523ENSMUST00000109549ENSMUST00000123932ENSMUST00000139263ENSMUST00000160213ENSMUSG00000074628ENSMUST00000099140ENSMUST00000166140
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101342 ENST00000217320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.331±0.00 N/A N/A
ENST00000436941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000101347 ENST00000262878 34.771±0.00 26.649±0.00 1.085±0.00 5.326±3.08 16.872±0.18 30.275±25.06 12.168±9.44 13.547±9.92 6.843±1.71 13.521±2.62 3.536±2.46 16.636±4.47 17.129±2.17 16.638±10.63
ENST00000465985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027639 ENSMUST00000057725 5.947±1.17 2.677±1.25 11.618±3.07 2.299±0.91 9.251±4.60 4.051±1.04 2.062±0.35 2.618±0.94 4.176±2.90 14.494±4.04 3.130±0.73 7.545±2.10 5.574±2.53 1.194±0.63
ENSMUST00000088523 N/A N/A N/A N/A N/A 8.654±0.00 N/A N/A N/A N/A N/A N/A N/A 0.793±0.00
ENSMUST00000109549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.920±0.00 N/A
ENSMUST00000123932 N/A N/A 3.497±0.00 1.186±0.00 N/A N/A N/A N/A 2.282±0.48 N/A N/A 5.202±0.00 2.562±0.60 0.440±0.09
ENSMUST00000139149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139263 5.825±0.00 N/A 5.709±0.24 N/A N/A 7.816±1.79 N/A N/A 3.617±0.48 N/A 2.674±0.62 13.102±0.43 6.110±2.62 1.257±0.00
ENSMUST00000142508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160213 N/A N/A N/A 13.145±0.00 N/A N/A N/A N/A N/A N/A N/A 60.838±0.00 66.595±11.32 9.354±0.00
ENSMUSG00000074628 ENSMUST00000099140 0.089±0.03 0.146±0.05 0.089±0.00 0.071±0.02 0.151±0.00 N/A 0.063±0.00 1.835±0.23 0.070±0.04 0.075±0.01 N/A 0.203±0.05 0.168±0.11 0.156±0.11
ENSMUST00000166140 N/A N/A N/A N/A N/A 3.767±1.01 0.102±0.00 N/A 0.056±0.00 N/A N/A N/A 0.051±0.00 0.106±0.01

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