C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004Y0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000181220-ENSG00000133619 CGP 9606 7:149472794-149734575
GeneTranscriptPositionBiotype
ENSG00000133619 (KRBA1)
KRAB-A domain containing 1 		ENST00000319551 (KRBA1-001) 149715057-149734575 protein_coding
ENST00000467333 (KRBA1-007) 149720950-149722040 protein_coding
ENST00000485033 (KRBA1-004) 149719639-149734571 protein_coding
ENST00000486744 (KRBA1-005) 149714781-149720124 protein_coding
ENST00000489951 (KRBA1-009) 149730040-149730697 retained_intron
ENST00000496080 (KRBA1-008) 149723561-149725441 retained_intron
ENST00000496259 (KRBA1-002) 149715011-149734571 protein_coding
ENST00000497895 (KRBA1-006) 149719422-149720990 protein_coding
ENST00000621069 (KRBA1-003) 149720101-149734571 nonsense_mediated_decay
ENSG00000133624 (ZNF767P)
zinc finger family member 767, pseudogene 		ENST00000463567 (ZNF767P-001) 149547154-149624727 processed_transcript
ENST00000472212 (ZNF767P-002) 149547159-149624752 processed_transcript
ENST00000481762 (ZNF767P-004) 149558786-149621150 processed_transcript
ENST00000486492 (ZNF767P-003) 149549083-149624628 processed_transcript
ENST00000493198 (ZNF767P-005) 149619749-149621344 retained_intron
ENST00000513792 (ZNF767P-006) 149619924-149624565 transcribed_unprocessed_pseudogene
ENSG00000181220 (ZNF746)
zinc finger protein 746 		ENST00000340622 (ZNF746-001) 149472794-149497817 protein_coding
ENST00000458143 (ZNF746-201) 149472796-149497807 protein_coding
ENST00000461958 (ZNF746-003) 149487620-149497733 protein_coding
ENST00000471735 (ZNF746-004) 149475378-149477872 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0004Y0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000057691-ENSMUSG00000042810 CGP 10090 6:48062395-48419855
GeneTranscriptPositionBiotype
ENSMUSG00000042810 (Krba1)
KRAB-A domain containing 1 		ENSMUST00000031815 (Krba1-002) 48395614-48416904 protein_coding
ENSMUST00000077093 (Krba1-003) 48395658-48419545 protein_coding
ENSMUST00000114571 (Krba1-001) 48395586-48419545 protein_coding
ENSMUST00000114572 (Krba1-201) 48395586-48419855 protein_coding
ENSMUST00000127980 (Krba1-005) 48395698-48403467 processed_transcript
ENSMUST00000132271 (Krba1-007) 48406339-48409307 processed_transcript
ENSMUST00000148697 (Krba1-006) 48404043-48408537 processed_transcript
ENSMUST00000154536 (Krba1-004) 48409199-48419545 retained_intron
ENSMUSG00000057691 (Zfp746)
zinc finger protein 746 		ENSMUST00000073124 (Zfp746-201) 48062395-48086593 protein_coding
ENSMUSG00000092888 (Gm22122)
predicted gene, 22122 		ENSMUST00000175147 (Gm22122-201) 48289228-48289427 snRNA
ENSMUSG00000097434 (Gm16630)
predicted gene, 16630 		ENSMUST00000180741 (Gm16630-201) 48130918-48395408 lincRNA
ENSMUST00000181943 (Gm16630-202) 48374136-48395342 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004Y0_0001ENSG00000133619ENST00000319551ENST00000467333ENST00000485033ENST00000486744ENST00000489951ENST00000496080ENST00000496259ENST00000497895ENST00000621069ENSG00000133624ENST00000463567ENST00000472212ENST00000481762ENST00000486492ENST00000493198ENST00000513792ENSG00000181220ENST00000340622ENST00000458143ENST00000461958ENST00000471735CIL_0004Y0_0002ENSMUSG00000042810ENSMUST00000031815ENSMUST00000077093ENSMUST00000114571ENSMUST00000114572ENSMUST00000127980ENSMUST00000132271ENSMUST00000148697ENSMUST00000154536ENSMUSG00000057691ENSMUST00000073124ENSMUSG00000092888ENSMUST00000175147ENSMUSG00000097434ENSMUST00000180741ENSMUST00000181943
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004Y0_0001ENSG00000133619ENST00000319551ENST00000467333ENST00000485033ENST00000489951ENST00000496080ENST00000496259ENST00000497895ENST00000621069ENSG00000133624ENST00000463567ENST00000472212ENST00000486492ENST00000493198ENST00000513792ENSG00000181220ENST00000340622ENST00000458143ENST00000461958CIL_0004Y0_0002ENSMUSG00000042810ENSMUST00000031815ENSMUST00000077093ENSMUST00000114572ENSMUST00000154536ENSMUSG00000057691ENSMUST00000073124ENSMUSG00000092888ENSMUST00000175147ENSMUSG00000097434ENSMUST00000180741ENSMUST00000181943
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000133619 ENST00000319551 0.367±0.00 N/A N/A 1.153±0.00 N/A N/A N/A N/A N/A N/A N/A 1.042±0.17 N/A 0.773±0.00
ENST00000467333 N/A N/A N/A N/A N/A N/A 0.310±0.00 0.243±0.00 0.154±0.00 N/A N/A N/A N/A N/A
ENST00000485033 N/A N/A N/A 0.239±0.00 0.793±0.00 N/A 1.106±1.04 N/A 0.136±0.02 0.069±0.00 0.538±0.00 1.205±0.34 0.511±0.18 0.957±0.00
ENST00000486744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489951 N/A N/A N/A N/A N/A N/A N/A N/A 0.691±0.00 N/A N/A N/A N/A N/A
ENST00000496080 N/A N/A 0.183±0.00 N/A N/A N/A N/A 1.102±0.00 N/A N/A N/A N/A N/A N/A
ENST00000496259 1.058±0.00 1.298±0.00 0.049±0.00 1.310±1.08 0.553±0.02 0.768±0.00 4.450±0.00 0.926±0.00 0.100±0.00 N/A 1.393±0.00 2.048±1.74 0.469±0.24 1.945±0.00
ENST00000497895 N/A N/A 1.059±0.00 N/A N/A N/A 0.448±0.00 N/A N/A 0.896±0.00 N/A 1.762±0.00 N/A N/A
ENST00000621069 N/A N/A N/A N/A N/A 0.149±0.00 N/A N/A N/A N/A N/A N/A 0.362±0.00 N/A
ENSG00000133624 ENST00000463567 N/A N/A N/A 0.799±0.01 0.687±0.00 N/A 0.634±0.00 0.461±0.00 0.452±0.00 0.908±0.00 N/A 2.726±0.00 0.719±0.00 1.070±0.20
ENST00000472212 N/A N/A N/A N/A N/A N/A 0.565±0.00 N/A N/A N/A N/A 1.057±0.52 0.208±0.00 1.049±0.00
ENST00000481762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486492 N/A N/A N/A N/A 1.247±0.00 0.851±0.00 N/A 0.298±0.00 1.827±0.00 1.706±0.00 N/A N/A 0.242±0.00 1.616±0.00
ENST00000493198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.183±0.00 N/A N/A
ENST00000513792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.002±0.00 N/A N/A
ENSG00000181220 ENST00000340622 N/A N/A N/A 2.349±0.35 0.637±0.00 N/A 0.669±0.36 N/A 1.071±0.26 0.559±0.00 N/A 2.484±0.07 2.728±1.91 5.811±0.00
ENST00000458143 2.606±0.00 N/A 0.670±0.00 2.818±0.00 4.238±0.00 N/A 0.570±0.38 1.625±0.81 0.940±0.10 3.522±0.00 1.268±0.00 5.291±0.47 1.869±0.68 6.726±0.67
ENST00000461958 N/A 0.622±0.00 0.324±0.00 N/A N/A N/A 0.111±0.00 0.392±0.00 N/A N/A N/A 0.320±0.00 N/A 2.264±0.00
ENST00000471735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042810 ENSMUST00000031815 2.864±0.40 13.479±2.46 6.941±0.72 8.931±3.60 5.630±2.97 3.835±1.99 2.788±1.01 2.906±1.17 1.732±0.68 4.733±0.78 8.191±3.47 9.988±3.16 3.586±0.88 12.961±4.46
ENSMUST00000077093 N/A 1.998±0.36 N/A 1.936±0.00 1.572±0.83 1.233±0.05 1.052±0.00 1.005±0.24 0.325±0.17 1.323±0.00 N/A 2.185±0.67 N/A 1.442±0.53
ENSMUST00000114571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000114572 N/A 3.403±0.36 0.919±0.00 2.279±0.00 N/A 1.081±0.04 0.779±0.00 0.780±0.00 0.336±0.17 0.869±0.09 N/A 4.041±0.78 N/A 4.980±0.58
ENSMUST00000127980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154536 1.006±0.00 4.803±1.92 N/A N/A N/A 2.380±0.00 N/A N/A 0.186±0.00 N/A N/A 3.623±1.09 0.466±0.00 N/A
ENSMUSG00000057691 ENSMUST00000073124 6.569±2.94 10.113±1.29 4.326±1.33 8.331±2.37 8.679±2.69 10.729±0.53 2.332±0.72 5.014±1.22 3.307±0.99 8.829±1.85 1.462±0.38 12.070±3.97 3.627±1.01 3.266±1.60
ENSMUSG00000092888 ENSMUST00000175147 4.389±0.00 N/A N/A 1.238±0.00 3.518±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097434 ENSMUST00000180741 0.012±0.00 0.079±0.04 N/A 0.043±0.01 0.049±0.02 0.032±0.00 0.014±0.01 0.012±0.00 0.022±0.02 0.012±0.00 0.015±0.00 0.053±0.02 0.009±0.00 0.282±0.09
ENSMUST00000181943 0.031±0.00 0.715±0.20 N/A 0.255±0.15 0.177±0.05 0.161±0.00 0.311±0.17 0.062±0.00 0.069±0.03 0.036±0.00 0.170±0.11 0.182±0.12 0.028±0.01 1.387±0.63

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