C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004ZO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000129295-ENSG00000165071 CGP 9606 8:132571953-132760712
GeneTranscriptPositionBiotype
ENSG00000129295 (LRRC6)
leucine rich repeat containing 6 		ENST00000250173 (LRRC6-201) 132572201-132675559 protein_coding
ENST00000518101 (LRRC6-005) 132643380-132675580 processed_transcript
ENST00000518642 (LRRC6-002) 132572199-132675559 protein_coding
ENST00000519085 (LRRC6-010) 132608405-132622688 protein_coding
ENST00000519595 (LRRC6-001) 132572070-132675592 protein_coding
ENST00000520446 (LRRC6-007) 132625272-132675592 processed_transcript
ENST00000521430 (LRRC6-003) 132638052-132675525 processed_transcript
ENST00000522584 (LRRC6-006) 132637985-132675558 nonsense_mediated_decay
ENST00000522597 (LRRC6-008) 132572425-132622793 retained_intron
ENST00000522789 (LRRC6-009) 132572199-132625387 protein_coding
ENST00000523503 (LRRC6-004) 132625312-132675559 processed_transcript
ENST00000618342 (LRRC6-202) 132571953-132661667 protein_coding
ENST00000620350 (LRRC6-203) 132571953-132675617 protein_coding
ENSG00000165071 (TMEM71)
transmembrane protein 71 		ENST00000356838 (TMEM71-001) 132709948-132760582 protein_coding
ENST00000377901 (TMEM71-002) 132709948-132760582 protein_coding
ENST00000517538 (TMEM71-009) 132747044-132760576 processed_transcript
ENST00000519016 (TMEM71-008) 132747014-132760630 protein_coding
ENST00000519187 (TMEM71-005) 132751802-132760548 protein_coding
ENST00000519304 (TMEM71-004) 132751824-132760582 protein_coding
ENST00000522334 (TMEM71-007) 132746948-132760630 protein_coding
ENST00000522594 (TMEM71-006) 132758374-132760712 retained_intron
ENST00000522780 (TMEM71-010) 132685007-132727986 protein_coding
ENST00000523829 (TMEM71-003) 132709945-132760561 protein_coding
ENST00000524079 (TMEM71-011) 132685007-132702239 processed_transcript
ENSG00000222570 (AF216667.1)
 ENST00000410638 (AF216667.1-201) 132680900-132681002 miRNA
CIL_0004ZO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022375-ENSMUSG00000036944 CGP 10090 15:66379858-66561046
GeneTranscriptPositionBiotype
ENSMUSG00000022375 (Lrrc6)
leucine rich repeat containing 6 (testis) 		ENSMUST00000023006 (Lrrc6-001) 66379858-66500910 protein_coding
ENSMUSG00000036944 (Tmem71)
transmembrane protein 71 		ENSMUST00000048372 (Tmem71-201) 66526212-66561046 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004ZO_0001ENSG00000129295ENST00000250173ENST00000518101ENST00000518642ENST00000519085ENST00000519595ENST00000520446ENST00000521430ENST00000522584ENST00000522597ENST00000522789ENST00000523503ENST00000618342ENST00000620350ENSG00000165071ENST00000356838ENST00000377901ENST00000517538ENST00000519016ENST00000519187ENST00000519304ENST00000522334ENST00000522594ENST00000522780ENST00000523829ENST00000524079ENSG00000222570ENST00000410638CIL_0004ZO_0002ENSMUSG00000022375ENSMUST00000023006ENSMUSG00000036944ENSMUST00000048372
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004ZO_0001ENSG00000129295ENST00000250173ENST00000518642ENST00000519085ENST00000519595ENST00000520446ENST00000521430ENST00000522584ENST00000522597ENST00000522789ENST00000523503ENST00000618342ENST00000620350ENSG00000165071ENST00000356838ENST00000377901ENST00000517538ENST00000519016ENST00000519187ENST00000519304ENST00000522334ENST00000522780ENST00000523829ENST00000524079ENSG00000222570ENST00000410638CIL_0004ZO_0002ENSMUSG00000022375ENSMUST00000023006ENSMUSG00000036944ENSMUST00000048372
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000129295 ENST00000250173 N/A N/A N/A N/A N/A N/A 0.152±0.00 N/A N/A N/A N/A 0.205±0.00 N/A N/A
ENST00000518101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518642 N/A N/A 0.497±0.00 N/A 0.814±0.33 0.299±0.00 N/A 0.922±0.00 0.071±0.00 0.268±0.00 N/A 0.316±0.00 N/A 9.019±0.00
ENST00000519085 0.372±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519595 0.325±0.00 0.365±0.00 1.471±0.00 N/A N/A N/A N/A 0.748±0.00 0.430±0.00 1.179±0.00 N/A 1.693±0.00 N/A 17.119±10.46
ENST00000520446 N/A N/A 1.386±0.00 N/A 3.463±0.00 1.115±0.00 0.307±0.00 N/A 2.606±0.00 N/A N/A N/A N/A N/A
ENST00000521430 N/A N/A N/A N/A N/A 0.213±0.00 0.346±0.21 N/A N/A N/A N/A N/A N/A N/A
ENST00000522584 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.327±0.00 N/A 0.873±0.00 N/A N/A
ENST00000522597 N/A N/A N/A N/A N/A 1.444±0.00 0.837±0.00 N/A N/A 1.754±0.00 N/A 0.677±0.00 N/A N/A
ENST00000522789 N/A 0.272±0.00 N/A N/A 0.538±0.00 0.460±0.00 0.181±0.00 3.389±0.00 0.301±0.00 3.385±0.00 N/A 0.882±0.03 0.319±0.08 21.301±0.00
ENST00000523503 N/A N/A N/A N/A 0.601±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618342 N/A N/A N/A N/A N/A 0.157±0.00 N/A N/A 0.127±0.00 0.543±0.00 N/A N/A N/A N/A
ENST00000620350 N/A N/A N/A N/A 0.239±0.00 N/A N/A N/A N/A N/A N/A N/A 0.280±0.00 N/A
ENSG00000165071 ENST00000356838 N/A N/A 0.030±0.00 0.044±0.04 0.562±0.24 1.381±0.00 1.395±0.00 N/A N/A 1.058±0.48 N/A 1.139±0.85 0.460±0.00 N/A
ENST00000377901 N/A 0.598±0.00 N/A 0.015±0.00 N/A N/A 1.175±0.35 0.227±0.00 0.102±0.02 0.608±0.13 N/A 0.744±0.09 0.424±0.26 0.441±0.00
ENST00000517538 N/A N/A N/A N/A N/A N/A N/A N/A 0.155±0.00 N/A N/A 5.175±0.00 0.347±0.12 N/A
ENST00000519016 N/A N/A N/A N/A N/A 0.747±0.00 N/A N/A N/A N/A 0.498±0.00 N/A N/A N/A
ENST00000519187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.462±0.00
ENST00000519304 N/A N/A N/A 0.160±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522334 N/A N/A N/A N/A 0.686±0.00 1.518±0.00 N/A N/A 0.272±0.00 N/A N/A 4.565±0.00 0.164±0.00 0.338±0.00
ENST00000522594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522780 N/A N/A N/A N/A 0.795±0.00 N/A N/A N/A N/A N/A 0.515±0.00 N/A N/A N/A
ENST00000523829 1.107±0.00 0.382±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.054±0.00 0.282±0.00 N/A 0.120±0.00
ENST00000524079 N/A N/A N/A 0.132±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000222570 ENST00000410638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.871±0.00 N/A 0.345±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022375 ENSMUST00000023006 0.019±0.00 0.113±0.01 0.050±0.01 0.580±0.60 N/A N/A 0.028±0.01 N/A 0.028±0.01 0.597±0.17 0.014±0.00 0.856±0.54 0.008±0.00 31.734±27.98
ENSMUSG00000036944 ENSMUST00000048372 0.814±0.29 3.456±0.99 1.198±0.16 0.049±0.01 4.076±1.06 0.248±0.05 1.668±0.36 0.443±0.06 0.268±0.17 4.204±0.18 0.417±0.08 1.834±0.79 0.131±0.12 0.063±0.02

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