C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000519595 LRRC6-001 ENSG00000129295 9606 - 8:132572070-132675592 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderKidneyLiverLungOvaryTestisENST00000519595
Transcript ID Adipose Adrenal Bladder Kidney Liver Lung Ovary Testis
ENST00000519595 0.325±0.00 0.365±0.00 1.471±0.00 0.748±0.00 0.430±0.00 1.179±0.00 1.693±0.00 17.119±10.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XM CIL_0000XM_0002 CGP 8:132120859-132675617
CIL_0004ZO CIL_0004ZO_0001 CGP 8:132571953-132760712

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003341 IMP cilium movement
GO:0003674 ND molecular_function
GO:0005515 IPI protein binding
GO:0005737 ISS cytoplasm
GO:0005929 IDA cilium
GO:0008584 ISS male gonad development
GO:0030317 IMP sperm motility
GO:0036158 IMP outer dynein arm assembly
GO:0036159 IMP inner dynein arm assembly
GO:0044458 IMP motile cilium assembly
GO:0060287 IMP epithelial cilium movement involved in determination of left/right asymmetry
GO:0061458 IMP reproductive system development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023006 Lrrc6-001 protein_coding Mus_musculus 0 1218

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