C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000509_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000071031-ENSDARG00000053204 CGP 7955 25:6265392-6321942
GeneTranscriptPositionBiotype
ENSDARG00000053204 (snx22)
sorting nexin 22 		ENSDART00000075197 (snx22-001) 6303697-6321942 protein_coding
ENSDART00000136054 (snx22-002) 6303684-6321822 protein_coding
ENSDARG00000071031 (snx1a)
sorting nexin 1a 		ENSDART00000075184 (snx1a-201) 6265392-6297495 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_000509_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000028528-ENSG00000157734 CGP 9606 15:64094123-64157481
GeneTranscriptPositionBiotype
ENSG00000157734 (SNX22)
sorting nexin 22 		ENST00000325881 (SNX22-001) 64151717-64157481 protein_coding
ENST00000557789 (SNX22-004) 64151715-64157481 retained_intron
ENST00000558466 (SNX22-003) 64151739-64155833 nonsense_mediated_decay
ENST00000560607 (SNX22-005) 64151741-64154762 retained_intron
ENST00000560945 (SNX22-002) 64151744-64154614 retained_intron
ENST00000560997 (SNX22-006) 64153480-64157480 retained_intron
ENST00000561334 (SNX22-007) 64151739-64154919 retained_intron
ENST00000622609 (SNX22-201) 64151739-64155820 protein_coding
ENSG00000166794 (PPIB)
peptidylprolyl isomerase B (cyclophilin B) 		ENST00000300026 (PPIB-001) 64155812-64163205 protein_coding
ENST00000558492 (PPIB-003) 64156778-64163006 processed_transcript
ENST00000561048 (PPIB-002) 64159274-64163021 retained_intron
ENSG00000201071 (Y_RNA)
Y RNA 		ENST00000364201 (Y_RNA.1-415) 64111458-64111569 misc_RNA

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000509_0001ENSDARG00000053204ENSDART00000075197ENSDART00000136054ENSDARG00000071031ENSDART00000075184CIL_000509_0002ENSG00000157734ENST00000325881ENST00000557789ENST00000558466ENST00000560607ENST00000560945ENST00000560997ENST00000561334ENST00000622609ENSG00000166794ENST00000300026ENST00000558492ENST00000561048ENSG00000201071ENST00000364201
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000509_0001ENSDARG00000053204ENSDART00000075197ENSDART00000136054ENSDARG00000071031ENSDART00000075184CIL_000509_0002ENSG00000157734ENST00000325881ENSG00000166794ENST00000300026ENST00000558492ENSG00000201071ENST00000364201
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000053204 ENSDART00000075197 N/A N/A N/A 3.595±1.41 N/A N/A 1.266±0.64 1.440±0.65 0.271±0.00 N/A 1.440±0.00 N/A N/A N/A
ENSDART00000136054 N/A N/A N/A N/A N/A N/A N/A 0.840±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000071031 ENSDART00000075184 N/A N/A N/A N/A N/A N/A 6.361±0.00 N/A 0.569±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000157734 ENST00000325881 N/A N/A N/A 6.833±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560607 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166794 ENST00000300026 280.708±0.00 467.086±0.00 35.682±0.00 66.235±25.34 159.963±83.44 172.653±113.20 38.573±21.08 272.000±170.52 341.736±294.13 187.247±132.07 20.475±11.08 327.514±143.41 635.407±147.34 195.099±118.83
ENST00000558492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 339.067±0.00 354.746±0.00 60.716±0.00
ENST00000561048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000201071 ENST00000364201 N/A N/A N/A N/A N/A N/A 0.374±0.00 N/A N/A N/A N/A N/A N/A N/A

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