C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidylprolyl isomerase B (cyclophilin B)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000300026 PPIB-001 ENSG00000166794 9606 - 15:64155812-64163205 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000300026
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000300026 280.708±0.00 467.086±0.00 35.682±0.00 66.235±25.34 159.963±83.44 172.653±113.20 38.573±21.08 272.000±170.52 341.736±294.13 187.247±132.07 20.475±11.08 327.514±143.41 635.407±147.34 195.099±118.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000509 CIL_000509_0002 CGP 15:64094123-64157481
CIL_0002JZ CIL_0002JZ_0002 CGP 15:64151715-64163205

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000413 ISS:IEA protein peptidyl-prolyl isomerization
GO:0003755 ISS:IEA peptidyl-prolyl cis-trans isomerase activity
GO:0005515 IPI protein binding
GO:0005518 ISS collagen binding
GO:0005634 IDA nucleus
GO:0005783 IDA endoplasmic reticulum
GO:0005788 NAS endoplasmic reticulum lumen
GO:0005790 IEA smooth endoplasmic reticulum
GO:0005925 IDA focal adhesion
GO:0006457 IEA protein folding
GO:0016020 IDA membrane
GO:0030198 TAS extracellular matrix organization
GO:0032403 ISS protein complex binding
GO:0032991 ISS macromolecular complex
GO:0040018 IMP positive regulation of multicellular organism growth
GO:0042277 IEA peptide binding
GO:0044822 IDA poly(A) RNA binding
GO:0050821 IMP protein stabilization
GO:0051082 TAS unfolded protein binding
GO:0060348 IMP bone development
GO:0061077 IDA chaperone-mediated protein folding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034947 Ppib-201 protein_coding Mus_musculus 0 859
ENSMUST00000044711 Snx22-201 protein_coding Mus_musculus 0 276

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