C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sorting nexin 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000325881 SNX22-001 ENSG00000157734 9606 + 15:64151717-64157481 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000325881
Transcript ID Brain
ENST00000325881 6.833±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000509 CIL_000509_0002 CGP 15:64094123-64157481
CIL_0002JZ CIL_0002JZ_0002 CGP 15:64151715-64163205

Gene Ontology

GO IDEvidence TypeGO Description
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0035091 IEA phosphatidylinositol binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044711 Snx22-201 protein_coding Mus_musculus 0 634
ENSMUST00000034947 Ppib-201 protein_coding Mus_musculus 0 276
ENSMUST00000168162 Pdgfra-202 protein_coding Mus_musculus 0.000005 58
ENSMUST00000000476 Pdgfra-201 protein_coding Mus_musculus 0.000005 58

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