C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00050V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000063030-ENSDARG00000079017 CGP 7955 7:12193959-12210608
GeneTranscriptPositionBiotype
ENSDARG00000063030 (mesdc2)
mesoderm development candidate 2 		ENSDART00000102515 (mesdc2-201) 12193959-12201889 protein_coding
ENSDARG00000079017 (MESDC1)
mesoderm development candidate 1 		ENSDART00000114383 (MESDC1-201) 12209544-12210608 protein_coding
CIL_00050V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000117899-ENSG00000140406 CGP 9606 15:80946289-81005788
GeneTranscriptPositionBiotype
ENSG00000103888 (CEMIP)
cell migration inducing protein, hyaluronan binding 		ENST00000220244 (CEMIP-003) 80779343-80951776 protein_coding
ENST00000356249 (CEMIP-002) 80779371-80951776 protein_coding
ENST00000394685 (CEMIP-001) 80779371-80951776 protein_coding
ENST00000495041 (CEMIP-004) 80936871-80943041 nonsense_mediated_decay
ENST00000559966 (CEMIP-006) 80946944-80949162 retained_intron
ENST00000560027 (CEMIP-005) 80933426-80938194 protein_coding
ENST00000611615 (CEMIP-201) 80779395-80949168 protein_coding
ENSG00000117899 (MESDC2)
mesoderm development candidate 2 		ENST00000261758 (MESDC2-001) 80975747-80989878 protein_coding
ENST00000422879 (MESDC2-003) 80948086-80989819 nonsense_mediated_decay
ENST00000559537 (MESDC2-006) 80952075-80989795 nonsense_mediated_decay
ENST00000560189 (MESDC2-004) 80948676-80979140 processed_transcript
ENST00000560244 (MESDC2-005) 80948502-80978813 processed_transcript
ENST00000561312 (MESDC2-201) 80947329-80989828 protein_coding
ENST00000619987 (MESDC2-002) 80946289-80989828 nonsense_mediated_decay
ENSG00000140406 (MESDC1)
mesoderm development candidate 1 		ENST00000267984 (MESDC1-001) 81000944-81005788 protein_coding
ENSG00000260619 (RP11-775C24.3)
 ENST00000563737 (RP11-775C24.3-001) 80990804-80993258 lincRNA
ENSG00000277782 (RP11-775C24.5)
 ENST00000620635 (RP11-775C24.5-001) 80999593-80999981 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00050V_0001ENSDARG00000063030ENSDART00000102515ENSDARG00000079017ENSDART00000114383CIL_00050V_0002ENSG00000103888ENST00000220244ENST00000356249ENST00000394685ENST00000495041ENST00000559966ENST00000560027ENST00000611615ENSG00000117899ENST00000261758ENST00000422879ENST00000559537ENST00000560189ENST00000560244ENST00000561312ENST00000619987ENSG00000140406ENST00000267984ENSG00000260619ENST00000563737ENSG00000277782ENST00000620635
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00050V_0001ENSDARG00000063030ENSDART00000102515ENSDARG00000079017ENSDART00000114383CIL_00050V_0002ENSG00000103888ENST00000220244ENST00000356249ENST00000394685ENST00000611615ENSG00000117899ENST00000261758ENST00000561312ENST00000619987ENSG00000140406ENST00000267984ENSG00000260619ENST00000563737ENSG00000277782ENST00000620635
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000063030 ENSDART00000102515 N/A N/A N/A 3.242±0.00 N/A N/A 2.049±0.00 1.850±0.94 N/A N/A N/A N/A N/A N/A
ENSDARG00000079017 ENSDART00000114383 N/A N/A N/A 2.401±2.04 N/A N/A 2.398±0.00 1.038±0.00 0.418±0.00 N/A 1.352±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103888 ENST00000220244 N/A N/A N/A 1.683±0.00 0.366±0.00 0.569±0.00 N/A N/A 0.714±0.00 6.929±5.45 N/A 1.644±0.74 N/A N/A
ENST00000356249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.291±0.00 N/A N/A
ENST00000394685 N/A N/A N/A 1.604±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.452±0.00 N/A N/A
ENSG00000117899 ENST00000261758 6.505±0.00 N/A 1.291±0.00 5.553±2.82 4.754±4.22 4.240±2.03 2.637±2.11 7.047±5.47 4.691±3.46 6.422±5.46 0.986±0.40 7.546±4.36 22.290±1.21 9.012±3.93
ENST00000422879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561312 2.337±0.00 N/A 0.826±0.00 N/A 1.043±0.00 N/A N/A 1.290±0.00 N/A N/A 0.636±0.00 4.180±0.00 19.169±0.00 6.382±0.00
ENST00000619987 N/A N/A 0.377±0.00 N/A N/A N/A 0.228±0.00 N/A 0.527±0.00 N/A 0.503±0.00 N/A N/A N/A
ENSG00000140406 ENST00000267984 7.015±0.00 5.605±0.00 0.530±0.00 1.900±0.75 2.889±1.60 1.669±0.70 1.203±0.67 2.103±1.24 1.208±0.47 9.395±7.94 0.281±0.09 2.151±0.76 4.202±1.34 0.959±0.59
ENSG00000260619 ENST00000563737 N/A 0.022±0.00 N/A 0.066±0.01 0.051±0.00 0.004±0.00 0.024±0.00 0.190±0.00 0.015±0.00 0.004±0.00 0.008±0.00 0.016±0.01 0.030±0.00 0.061±0.02
ENSG00000277782 ENST00000620635 1.906±0.00 5.376±0.00 N/A 2.096±0.80 4.128±2.66 0.227±0.00 1.150±0.00 1.837±0.00 1.065±0.00 1.603±1.47 0.209±0.00 1.457±1.07 3.259±0.00 1.301±0.74

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