C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000515_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000144596-ENSG00000154781 CGP 9606 3:14489111-14672659
GeneTranscriptPositionBiotype
ENSG00000144596 (GRIP2)
glutamate receptor interacting protein 2 		ENST00000413414 (GRIP2-003) 14520692-14540343 retained_intron
ENST00000422481 (GRIP2-002) 14520692-14525983 retained_intron
ENST00000430219 (GRIP2-004) 14491170-14512858 nonsense_mediated_decay
ENST00000619221 (GRIP2-201) 14489111-14542081 protein_coding
ENST00000621039 (GRIP2-001) 14489111-14540374 protein_coding
ENSG00000154781 (CCDC174)
coiled-coil domain containing 174 		ENST00000303688 (CCDC174-004) 14651764-14672659 protein_coding
ENST00000383794 (CCDC174-001) 14651764-14672659 protein_coding
ENST00000463438 (CCDC174-005) 14651764-14661900 retained_intron
ENST00000465759 (CCDC174-003) 14651773-14667298 retained_intron
ENST00000476763 (CCDC174-006) 14668002-14671027 processed_transcript
ENST00000611584 (CCDC174-201) 14651746-14672653 protein_coding
ENSG00000234123 (RHBDF1P1)
rhomboid 5 homolog 1 (Drosophila) pseudogene 1 		ENST00000427504 (RHBDF1P1-001) 14572852-14574792 processed_pseudogene
ENSG00000235629 (AC090952.5)
 ENST00000424242 (AC090952.5-001) 14648194-14649432 antisense
CIL_000515_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030098-ENSMUSG00000034083 CGP 10090 6:91761509-91899843
GeneTranscriptPositionBiotype
ENSMUSG00000030098 (Grip2)
glutamate receptor interacting protein 2 		ENSMUST00000159684 (Grip2-002) 91763448-91807318 protein_coding
ENSMUST00000161545 (Grip2-004) 91784730-91796244 nonsense_mediated_decay
ENSMUST00000161566 (Grip2-003) 91783657-91807393 nonsense_mediated_decay
ENSMUST00000162293 (Grip2-005) 91761509-91827250 nonsense_mediated_decay
ENSMUST00000162300 (Grip2-001) 91761509-91807456 protein_coding
ENSMUSG00000034083 (Ccdc174)
coiled-coil domain containing 174 		ENSMUST00000037783 (Ccdc174-001) 91878053-91899843 protein_coding
ENSMUST00000136090 (Ccdc174-002) 91878053-91899843 retained_intron
ENSMUST00000138868 (Ccdc174-003) 91878075-91884987 retained_intron
ENSMUST00000139240 (Ccdc174-005) 91878075-91888317 processed_transcript
ENSMUST00000147188 (Ccdc174-006) 91892347-91895293 retained_intron
ENSMUST00000149546 (Ccdc174-004) 91878072-91880511 processed_transcript
ENSMUST00000151378 (Ccdc174-007) 91892804-91895339 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000515_0001ENSG00000144596ENST00000413414ENST00000422481ENST00000430219ENST00000619221ENST00000621039ENSG00000154781ENST00000303688ENST00000383794ENST00000463438ENST00000465759ENST00000476763ENST00000611584ENSG00000234123ENST00000427504ENSG00000235629ENST00000424242CIL_000515_0002ENSMUSG00000030098ENSMUST00000159684ENSMUST00000161545ENSMUST00000161566ENSMUST00000162293ENSMUST00000162300ENSMUSG00000034083ENSMUST00000037783ENSMUST00000136090ENSMUST00000138868ENSMUST00000139240ENSMUST00000147188ENSMUST00000149546ENSMUST00000151378
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000515_0001ENSG00000144596ENST00000413414ENST00000430219ENST00000621039ENSG00000154781ENST00000303688ENST00000383794ENST00000463438ENST00000465759ENST00000476763ENSG00000234123ENST00000427504ENSG00000235629ENST00000424242CIL_000515_0002ENSMUSG00000030098ENSMUST00000159684ENSMUST00000161545ENSMUST00000161566ENSMUST00000162293ENSMUST00000162300ENSMUSG00000034083ENSMUST00000037783ENSMUST00000136090ENSMUST00000138868
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000144596 ENST00000413414 N/A N/A N/A N/A N/A 0.571±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430219 N/A N/A N/A 0.730±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.809±0.00 0.920±0.00
ENST00000619221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621039 N/A N/A N/A 0.733±0.42 N/A 0.322±0.00 1.291±0.97 0.031±0.00 N/A N/A 1.390±0.00 N/A 1.127±0.00 0.982±0.00
ENSG00000154781 ENST00000303688 N/A 1.654±0.00 N/A 1.415±0.00 N/A N/A 0.329±0.00 N/A N/A 1.258±0.00 1.017±0.00 0.411±0.00 N/A N/A
ENST00000383794 2.294±0.00 3.743±0.00 1.192±0.00 1.372±0.74 2.114±1.06 2.347±1.67 1.459±1.32 2.871±2.23 2.278±0.47 1.113±0.03 2.933±0.00 4.553±2.19 4.157±0.39 9.223±2.83
ENST00000463438 N/A N/A N/A 0.860±0.00 2.180±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465759 0.949±0.00 N/A N/A N/A 2.455±0.00 N/A N/A N/A 0.657±0.00 N/A N/A 0.436±0.00 N/A N/A
ENST00000476763 3.701±0.00 N/A N/A N/A 3.419±0.00 5.657±0.00 N/A N/A 3.027±0.00 3.948±0.00 4.947±0.00 3.294±0.00 N/A 10.384±0.19
ENST00000611584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000234123 ENST00000427504 0.012±0.00 N/A 0.415±0.00 N/A N/A N/A N/A 0.195±0.00 N/A N/A N/A N/A N/A 0.423±0.17
ENSG00000235629 ENST00000424242 N/A 0.188±0.00 N/A N/A N/A N/A N/A N/A 0.220±0.00 N/A N/A N/A N/A 0.294±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030098 ENSMUST00000159684 N/A N/A N/A N/A 0.073±0.00 0.127±0.00 N/A N/A 0.041±0.04 0.132±0.00 N/A 0.356±0.12 N/A N/A
ENSMUST00000161545 N/A N/A N/A N/A N/A N/A N/A N/A 0.011±0.00 N/A N/A N/A N/A 0.134±0.03
ENSMUST00000161566 N/A N/A N/A N/A N/A N/A N/A N/A 0.043±0.01 N/A N/A 1.385±0.65 N/A 0.116±0.00
ENSMUST00000162293 0.149±0.00 N/A N/A 0.786±0.20 N/A 0.120±0.00 N/A 0.280±0.00 N/A N/A 1.032±0.00 0.178±0.00 0.037±0.00 0.053±0.00
ENSMUST00000162300 0.320±0.06 0.641±0.24 0.388±0.23 3.033±0.50 0.555±0.33 0.205±0.12 4.981±0.86 0.707±0.33 0.031±0.02 0.190±0.08 0.576±0.25 0.369±0.20 0.073±0.04 0.051±0.04
ENSMUSG00000034083 ENSMUST00000037783 1.113±0.22 3.432±2.95 4.915±0.37 11.192±6.83 2.543±1.22 0.698±0.34 0.526±0.18 1.116±0.64 2.925±2.25 0.969±0.52 3.550±0.64 8.203±9.88 12.262±7.79 16.831±21.44
ENSMUST00000136090 0.288±0.11 0.614±0.20 0.473±0.01 N/A 0.354±0.15 0.262±0.09 0.113±0.03 0.143±0.02 0.204±0.06 0.395±0.05 N/A 0.493±0.23 N/A N/A
ENSMUST00000138868 0.339±0.04 0.505±0.02 N/A N/A 0.389±0.05 0.266±0.04 0.120±0.03 0.196±0.01 0.455±0.20 0.379±0.12 N/A 0.324±0.10 0.513±0.04 N/A
ENSMUST00000139240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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