C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00053S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000041341-ENSDARG00000041338 CGP 7955 7:65340359-65359023
GeneTranscriptPositionBiotype
ENSDARG00000041338 (mrpl15)
mitochondrial ribosomal protein L15
ENSDART00000060592 (mrpl15-201) 65353116-65359023 protein_coding
ENSDARG00000041341 (sox32)
SRY-box containing gene 32
ENSDART00000060597 (sox32-201) 65340359-65342023 protein_coding
CIL_00053S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025902-ENSMUSG00000033845 CGP 10090 1:4490928-4785739
GeneTranscriptPositionBiotype
ENSMUSG00000025902 (Sox17)
SRY (sex determining region Y)-box 17
ENSMUST00000027035 (Sox17-201) 4490928-4496413 protein_coding
ENSMUST00000116652 (Sox17-202) 4491713-4496363 protein_coding
ENSMUSG00000033845 (Mrpl15)
mitochondrial ribosomal protein L15
ENSMUST00000045689 (Mrpl15-003) 4774436-4785698 nonsense_mediated_decay
ENSMUST00000115538 (Mrpl15-006) 4776377-4785739 processed_transcript
ENSMUST00000130201 (Mrpl15-002) 4773206-4785710 protein_coding
ENSMUST00000132625 (Mrpl15-005) 4783572-4785692 retained_intron
ENSMUST00000146665 (Mrpl15-004) 4781221-4785739 processed_transcript
ENSMUST00000156816 (Mrpl15-001) 4773211-4785739 protein_coding
ENSMUSG00000088000 (Gm25493)
predicted gene, 25493
ENSMUST00000157375 (Gm25493-201) 4723277-4723379 snRNA
ENSMUSG00000096126 (Gm22307)
predicted gene, 22307
ENSMUST00000180019 (Gm22307-201) 4529017-4529123 snRNA
ENSMUSG00000098104 (Gm6085)
predicted gene 6085
ENSMUST00000182774 (Gm6085-001) 4687934-4689403 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00053S_0001ENSDARG00000041338ENSDART00000060592ENSDARG00000041341ENSDART00000060597CIL_00053S_0002ENSMUSG00000025902ENSMUST00000027035ENSMUST00000116652ENSMUSG00000033845ENSMUST00000045689ENSMUST00000115538ENSMUST00000130201ENSMUST00000132625ENSMUST00000146665ENSMUST00000156816ENSMUSG00000088000ENSMUST00000157375ENSMUSG00000096126ENSMUST00000180019ENSMUSG00000098104ENSMUST00000182774
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00053S_0001ENSDARG00000041338ENSDART00000060592ENSDARG00000041341ENSDART00000060597CIL_00053S_0002ENSMUSG00000025902ENSMUST00000027035ENSMUST00000116652ENSMUSG00000033845ENSMUST00000045689ENSMUST00000115538ENSMUST00000130201ENSMUST00000132625ENSMUST00000146665ENSMUST00000156816ENSMUSG00000088000ENSMUST00000157375ENSMUSG00000096126ENSMUST00000180019ENSMUSG00000098104ENSMUST00000182774
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000041338 ENSDART00000060592 N/A N/A N/A 12.367±3.51 N/A N/A 37.059±14.61 18.560±4.25 5.034±0.00 N/A 20.042±0.00 N/A N/A N/A
ENSDARG00000041341 ENSDART00000060597 N/A N/A N/A 0.122±0.07 N/A N/A 0.068±0.02 N/A N/A N/A 0.108±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025902 ENSMUST00000027035 26.781±0.00 6.539±1.08 2.404±0.23 1.330±0.00 4.971±1.69 1.221±0.36 1.280±0.07 3.111±2.13 0.403±0.16 26.037±4.58 0.469±0.00 18.416±6.57 0.778±0.15 0.981±0.62
ENSMUST00000116652 23.432±12.03 27.742±8.06 4.566±0.06 3.637±1.55 5.142±2.65 1.363±0.45 1.318±0.00 6.562±4.13 1.350±0.85 13.440±0.00 N/A 42.072±14.64 7.642±0.00 N/A
ENSMUSG00000033845 ENSMUST00000045689 4.718±1.22 2.292±1.05 N/A N/A 3.357±0.72 2.478±0.45 N/A 3.409±0.10 7.800±0.83 N/A 16.428±0.44 7.083±6.37 32.307±0.00 N/A
ENSMUST00000115538 8.454±1.11 1.096±0.58 16.984±0.38 12.403±1.60 6.065±2.15 7.686±3.57 15.096±2.33 10.719±2.50 21.562±7.41 5.456±0.89 35.859±2.63 7.149±6.73 33.294±11.59 15.737±5.05
ENSMUST00000130201 0.767±0.00 0.593±0.32 2.334±0.04 1.710±0.00 1.016±0.29 1.293±0.34 2.559±0.36 1.735±0.24 3.461±1.45 1.061±0.11 3.733±0.00 0.651±0.26 4.796±3.11 2.607±0.06
ENSMUST00000132625 N/A N/A N/A N/A N/A 6.338±2.02 N/A N/A N/A N/A N/A N/A N/A 11.358±0.00
ENSMUST00000146665 1.831±0.35 0.813±0.33 3.458±0.11 3.326±1.76 1.081±0.22 2.074±0.85 1.598±0.35 1.691±0.42 5.123±2.03 1.214±0.36 3.889±0.67 1.279±0.54 6.502±1.09 1.595±0.34
ENSMUST00000156816 0.773±0.35 0.253±0.13 0.825±0.00 0.955±0.09 0.423±0.10 0.478±0.17 0.585±0.14 0.609±0.08 0.987±0.31 0.437±0.08 1.898±0.00 0.458±0.15 0.639±0.33 N/A
ENSMUSG00000088000 ENSMUST00000157375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 163.916±0.00 N/A
ENSMUSG00000096126 ENSMUST00000180019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 54.285±20.62 32.404±0.00 N/A
ENSMUSG00000098104 ENSMUST00000182774 0.078±0.00 N/A 0.034±0.00 0.068±0.03 0.057±0.02 0.040±0.02 0.026±0.00 0.054±0.02 0.025±0.01 0.041±0.02 0.038±0.00 0.117±0.09 0.071±0.03 0.022±0.00

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