C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00054T_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000120053-ENSG00000119919 CGP 9606 10:99396870-99536524
GeneTranscriptPositionBiotype
ENSG00000120053 (GOT1)
glutamic-oxaloacetic transaminase 1, soluble 		ENST00000370508 (GOT1-001) 99396870-99430593 protein_coding
ENST00000471741 (GOT1-003) 99420267-99430624 processed_transcript
ENST00000489349 (GOT1-002) 99397465-99403749 processed_transcript
ENSG00000224934 (RP11-441O15.3)
 ENST00000416191 (RP11-441O15.3-001) 99431191-99438117 lincRNA
ENSG00000228778 (RP11-129J12.1)
 ENST00000452494 (RP11-129J12.1-001) 99527081-99528261 lincRNA
ENSG00000257582 (LINC01475)
long intergenic non-protein coding RNA 1475 		ENST00000548010 (LINC01475-001) 99526350-99531177 lincRNA
ENST00000552096 (LINC01475-002) 99526350-99527443 lincRNA
CIL_00054T_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025190-ENSMUSG00000044220 CGP 10090 19:43499752-43615892
GeneTranscriptPositionBiotype
ENSMUSG00000025190 (Got1)
glutamic-oxaloacetic transaminase 1, soluble 		ENSMUST00000026196 (Got1-001) 43499752-43524605 protein_coding
ENSMUST00000124954 (Got1-003) 43512254-43524485 processed_transcript
ENSMUST00000132504 (Got1-004) 43500315-43504796 retained_intron
ENSMUST00000133325 (Got1-002) 43500021-43515865 nonsense_mediated_decay
ENSMUSG00000044220 (Nkx2-3)
NK2 homeobox 3 		ENSMUST00000057178 (Nkx2-3-001) 43612325-43615892 protein_coding
ENSMUSG00000092250 (Gm20467)
predicted gene 20467 		ENSMUST00000172872 (Gm20467-001) 43609077-43610625 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00054T_0001ENSG00000120053ENST00000370508ENST00000471741ENST00000489349ENSG00000224934ENST00000416191ENSG00000228778ENST00000452494ENSG00000257582ENST00000548010ENST00000552096CIL_00054T_0002ENSMUSG00000025190ENSMUST00000026196ENSMUST00000124954ENSMUST00000132504ENSMUST00000133325ENSMUSG00000044220ENSMUST00000057178ENSMUSG00000092250ENSMUST00000172872
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00054T_0001ENSG00000120053ENST00000370508ENST00000489349ENSG00000224934ENST00000416191ENSG00000228778ENST00000452494ENSG00000257582ENST00000548010ENST00000552096CIL_00054T_0002ENSMUSG00000025190ENSMUST00000026196ENSMUST00000132504ENSMUST00000133325ENSMUSG00000044220ENSMUST00000057178ENSMUSG00000092250ENSMUST00000172872
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120053 ENST00000370508 4.542±0.00 6.380±0.00 10.272±0.00 68.551±31.23 4.793±2.67 8.294±0.15 102.755±76.34 62.767±35.50 42.794±42.16 4.526±3.33 47.734±11.55 13.456±1.86 12.185±1.18 20.736±1.46
ENST00000471741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489349 N/A N/A N/A N/A N/A N/A N/A 38.712±0.00 37.360±0.00 2.194±1.19 N/A N/A N/A 12.544±0.00
ENSG00000224934 ENST00000416191 0.054±0.00 0.089±0.00 N/A 0.191±0.04 0.136±0.03 0.099±0.00 0.047±0.02 0.151±0.06 0.022±0.00 0.108±0.00 0.247±0.00 0.204±0.13 0.026±0.00 0.226±0.12
ENSG00000228778 ENST00000452494 N/A N/A N/A N/A N/A 0.504±0.20 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000257582 ENST00000548010 N/A N/A N/A N/A N/A 0.203±0.00 N/A N/A N/A N/A N/A N/A N/A 0.065±0.00
ENST00000552096 N/A N/A N/A N/A N/A 0.424±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025190 ENSMUST00000026196 6.530±3.23 46.570±13.04 23.100±1.62 39.770±24.71 19.385±10.18 13.492±3.40 248.367±28.97 54.061±2.17 84.021±69.70 9.697±0.85 125.228±8.62 22.652±5.66 24.612±5.39 5.393±2.35
ENSMUST00000124954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132504 N/A N/A N/A 147.651±0.00 N/A N/A N/A N/A N/A N/A N/A 24.382±0.00 33.672±5.99 N/A
ENSMUST00000133325 N/A N/A N/A N/A 7.230±0.00 N/A N/A N/A N/A N/A N/A 7.351±0.89 6.599±1.07 0.753±0.00
ENSMUSG00000044220 ENSMUST00000057178 N/A 0.014±0.00 0.010±0.00 0.596±0.30 0.086±0.00 8.823±1.68 N/A N/A 0.071±0.04 0.021±0.01 N/A 0.033±0.00 0.939±0.83 0.042±0.02
ENSMUSG00000092250 ENSMUST00000172872 N/A N/A N/A 0.064±0.00 N/A 3.533±1.25 N/A 0.060±0.02 0.046±0.03 N/A N/A N/A 0.290±0.25 0.054±0.04

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