C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamic-oxaloacetic transaminase 1, soluble
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370508 GOT1-001 ENSG00000120053 9606 - 10:99396870-99430593 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000370508
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000370508 4.542±0.00 6.380±0.00 10.272±0.00 68.551±31.23 4.793±2.67 8.294±0.15 102.755±76.34 62.767±35.50 42.794±42.16 4.526±3.33 47.734±11.55 13.456±1.86 12.185±1.18 20.736±1.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00054U CIL_00054U_0001 CGP 10:99329099-99430624
CIL_00054T CIL_00054T_0001 CGP 10:99396870-99536524

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000096 TAS sulfur amino acid metabolic process
GO:0004069 ISS L-aspartate:2-oxoglutarate aminotransferase activity
GO:0004609 IEA phosphatidylserine decarboxylase activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005764 IEA lysosome
GO:0005829 TAS cytosol
GO:0005975 TAS carbohydrate metabolic process
GO:0006006 TAS glucose metabolic process
GO:0006094 TAS gluconeogenesis
GO:0006103 ISS 2-oxoglutarate metabolic process
GO:0006107 IEA oxaloacetate metabolic process
GO:0006114 ISS glycerol biosynthetic process
GO:0006531 ISS aspartate metabolic process
GO:0006532 IEA aspartate biosynthetic process
GO:0006533 IDA aspartate catabolic process
GO:0006536 ISS glutamate metabolic process
GO:0006595 TAS polyamine metabolic process
GO:0008483 TAS transaminase activity
GO:0008652 TAS cellular amino acid biosynthetic process
GO:0009058 IEA biosynthetic process
GO:0019509 TAS L-methionine biosynthetic process from methylthioadenosine
GO:0019550 IEA glutamate catabolic process to aspartate
GO:0019551 IEA glutamate catabolic process to 2-oxoglutarate
GO:0030170 IEA pyridoxal phosphate binding
GO:0031406 IEA carboxylic acid binding
GO:0032869 IEP cellular response to insulin stimulus
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0043648 IEA dicarboxylic acid metabolic process
GO:0043679 IEA axon terminus
GO:0044281 TAS small molecule metabolic process
GO:0047801 ISS L-cysteine:2-oxoglutarate aminotransferase activity
GO:0051384 IEP response to glucocorticoid
GO:0055089 IEA fatty acid homeostasis
GO:0070062 IDA extracellular vesicular exosome
GO:0080130 IEA L-phenylalanine:2-oxoglutarate aminotransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026196 Got1-001 protein_coding Mus_musculus 0 1450
ENSMUST00000132504 Got1-004 retained_intron Mus_musculus 0 536
ENSMUST00000133325 Got1-002 nonsense_mediated_decay Mus_musculus 0 536

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