C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00058D_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000041589-ENSDARG00000041592 CGP 7955 1:74985-89602
GeneTranscriptPositionBiotype
ENSDARG00000041589 (adprhl1)
ADP-ribosylhydrolase like 1 		ENSDART00000060968 (adprhl1-201) 74985-80899 protein_coding
ENSDARG00000041592 (dcun1d2b)
DCN1, defective in cullin neddylation 1, domain containing 2b 		ENSDART00000060971 (dcun1d2b-201) 82875-89602 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00058D_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000153531-ENSG00000150401 CGP 9606 13:113421940-113490952
GeneTranscriptPositionBiotype
ENSG00000150401 (DCUN1D2)
DCN1, defective in cullin neddylation 1, domain containing 2 		ENST00000332592 (DCUN1D2-002) 113455819-113490691 protein_coding
ENST00000375403 (DCUN1D2-001) 113455819-113490691 nonsense_mediated_decay
ENST00000438545 (DCUN1D2-003) 113459312-113490608 nonsense_mediated_decay
ENST00000439909 (DCUN1D2-004) 113480648-113490691 protein_coding
ENST00000460318 (DCUN1D2-005) 113480466-113483996 processed_transcript
ENST00000465710 (DCUN1D2-007) 113483963-113490494 protein_coding
ENST00000465938 (DCUN1D2-009) 113474197-113484190 protein_coding
ENST00000478244 (DCUN1D2-006) 113457047-113490952 protein_coding
ENST00000482038 (DCUN1D2-011) 113457797-113459543 retained_intron
ENST00000491647 (DCUN1D2-010) 113461055-113463088 retained_intron
ENST00000496873 (DCUN1D2-008) 113474210-113490951 protein_coding
ENSG00000153531 (ADPRHL1)
ADP-ribosylhydrolase like 1 		ENST00000356501 (ADPRHL1-001) 113421940-113449142 protein_coding
ENST00000375418 (ADPRHL1-002) 113422633-113453524 protein_coding
ENST00000413169 (ADPRHL1-003) 113425052-113449277 protein_coding
ENSG00000202347 (RNU1-16P)
RNA, U1 small nuclear 16, pseudogene 		ENST00000365477 (RNU1-16P-201) 113478915-113479078 snRNA
ENSG00000233613 (DCUN1D2-AS)
DCUN1D2 antisense RNA 		ENST00000414992 (DCUN1D2-AS-001) 113468901-113476135 antisense
ENST00000453584 (DCUN1D2-AS-002) 113475390-113476135 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_00058D_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031448-ENSMUSG00000038506 CGP 10090 8:13235655-13288126
GeneTranscriptPositionBiotype
ENSMUSG00000031448 (Adprhl1)
ADP-ribosylhydrolase like 1 		ENSMUST00000033825 (Adprhl1-001) 13235655-13254162 protein_coding
ENSMUST00000166438 (Adprhl1-003) 13242262-13243085 retained_intron
ENSMUST00000168498 (Adprhl1-004) 13242510-13254071 protein_coding
ENSMUST00000171619 (Adprhl1-002) 13242642-13254096 protein_coding
ENSMUSG00000038497 (Tmco3)
transmembrane and coiled-coil domains 3 		ENSMUST00000045229 (Tmco3-201) 13288013-13322924 protein_coding
ENSMUSG00000038506 (Dcun1d2)
DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae) 		ENSMUST00000045366 (Dcun1d2-201) 13255963-13288126 protein_coding
ENSMUST00000110838 (Dcun1d2-202) 13255963-13288126 protein_coding
ENSMUST00000110839 (Dcun1d2-203) 13255963-13288126 protein_coding
ENSMUST00000110840 (Dcun1d2-204) 13255963-13288126 protein_coding
ENSMUSG00000089026 (Gm25014)
predicted gene, 25014 		ENSMUST00000158401 (Gm25014-201) 13283115-13283217 snRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00058D_0001ENSDARG00000041589ENSDART00000060968ENSDARG00000041592ENSDART00000060971CIL_00058D_0002ENSG00000150401ENST00000332592ENST00000375403ENST00000438545ENST00000439909ENST00000460318ENST00000465710ENST00000465938ENST00000478244ENST00000482038ENST00000491647ENST00000496873ENSG00000153531ENST00000356501ENST00000375418ENST00000413169ENSG00000202347ENST00000365477ENSG00000233613ENST00000414992ENST00000453584CIL_00058D_0003ENSMUSG00000031448ENSMUST00000033825ENSMUST00000166438ENSMUST00000168498ENSMUST00000171619ENSMUSG00000038497ENSMUST00000045229ENSMUSG00000038506ENSMUST00000045366ENSMUST00000110838ENSMUST00000110839ENSMUST00000110840ENSMUSG00000089026ENSMUST00000158401
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00058D_0001ENSDARG00000041589ENSDART00000060968ENSDARG00000041592ENSDART00000060971CIL_00058D_0002ENSG00000150401ENST00000332592ENST00000375403ENST00000438545ENST00000465938ENST00000478244ENSG00000153531ENST00000356501ENST00000375418ENST00000413169ENSG00000202347ENST00000365477ENSG00000233613ENST00000414992ENST00000453584CIL_00058D_0003ENSMUSG00000031448ENSMUST00000033825ENSMUST00000166438ENSMUST00000168498ENSMUST00000171619ENSMUSG00000038497ENSMUST00000045229ENSMUSG00000038506ENSMUST00000045366ENSMUST00000110838ENSMUST00000110839ENSMUST00000110840ENSMUSG00000089026ENSMUST00000158401
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000041589 ENSDART00000060968 N/A N/A N/A 1.021±0.83 N/A N/A 126.133±0.00 1.458±0.00 0.387±0.00 N/A 0.931±0.00 N/A N/A N/A
ENSDARG00000041592 ENSDART00000060971 N/A N/A N/A 6.263±4.98 N/A N/A 14.838±2.48 2.408±0.00 0.378±0.00 N/A 5.368±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000150401 ENST00000332592 1.091±0.00 2.413±0.00 N/A 7.510±0.00 2.232±0.00 0.536±0.00 10.909±8.61 1.788±0.00 1.024±0.00 1.930±0.00 11.249±4.43 1.922±0.84 1.186±0.33 1.400±0.00
ENST00000375403 N/A 1.011±0.00 N/A N/A 0.396±0.00 1.219±0.28 1.932±0.00 1.530±0.00 0.268±0.07 0.398±0.00 N/A 2.574±1.76 1.032±0.22 3.670±1.07
ENST00000438545 N/A N/A 0.676±0.00 N/A N/A 1.144±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465938 2.269±0.00 N/A N/A 10.995±0.00 2.373±0.41 N/A 24.782±0.00 N/A 1.870±0.00 N/A 20.854±0.00 2.008±0.00 N/A N/A
ENST00000478244 N/A N/A N/A N/A N/A N/A 1.318±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000482038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000153531 ENST00000356501 0.881±0.00 0.537±0.00 N/A 1.070±0.00 0.862±0.60 0.464±0.00 N/A 0.284±0.09 0.119±0.00 0.687±0.00 N/A 1.897±1.05 1.537±0.08 0.487±0.00
ENST00000375418 N/A 0.223±0.00 0.230±0.00 1.151±0.00 0.999±0.00 0.588±0.04 46.201±20.63 N/A 0.244±0.00 N/A 10.227±0.00 0.668±0.00 0.480±0.00 0.493±0.00
ENST00000413169 N/A N/A N/A N/A N/A N/A N/A N/A 1.079±0.00 0.501±0.00 N/A 2.443±0.00 0.860±0.00 N/A
ENSG00000202347 ENST00000365477 N/A 0.714±0.00 N/A 0.806±0.30 N/A 9.278±0.00 0.831±0.00 N/A N/A N/A N/A 2.905±0.00 N/A N/A
ENSG00000233613 ENST00000414992 N/A N/A N/A 1.205±0.00 0.156±0.00 0.365±0.00 0.488±0.00 0.303±0.00 N/A 0.276±0.00 N/A N/A N/A 0.350±0.00
ENST00000453584 N/A N/A N/A N/A N/A 0.116±0.00 N/A N/A N/A N/A N/A 0.207±0.00 1.083±0.00 0.872±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031448 ENSMUST00000033825 0.545±0.38 0.173±0.07 0.236±0.05 0.108±0.00 0.840±0.72 0.069±0.03 146.002±42.71 0.349±0.21 0.039±0.03 0.819±0.45 13.737±3.59 0.129±0.01 0.060±0.05 0.031±0.00
ENSMUST00000166438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.056±0.01 N/A N/A
ENSMUST00000168498 N/A N/A N/A 0.060±0.02 0.235±0.13 N/A N/A 0.138±0.00 0.021±0.00 N/A N/A 0.191±0.04 0.090±0.07 0.056±0.00
ENSMUST00000171619 0.114±0.00 0.598±0.51 N/A 0.026±0.00 1.327±1.21 N/A N/A N/A N/A 0.455±0.00 N/A 0.474±0.00 0.052±0.04 0.099±0.00
ENSMUSG00000038497 ENSMUST00000045229 5.323±0.70 13.692±0.47 3.166±0.86 5.402±3.10 9.207±1.83 31.376±8.02 4.246±0.63 12.858±4.49 1.903±0.62 9.664±0.25 2.795±0.28 9.738±4.95 1.687±0.94 1.736±1.09
ENSMUSG00000038506 ENSMUST00000045366 2.784±0.00 8.637±4.56 N/A 5.018±2.00 N/A N/A 12.537±2.43 N/A 1.733±0.55 3.355±0.12 26.057±3.18 3.203±0.56 2.414±0.53 0.985±0.43
ENSMUST00000110838 N/A N/A N/A N/A 2.072±0.00 N/A N/A N/A 1.396±0.00 N/A N/A 5.239±0.00 1.259±0.10 0.692±0.31
ENSMUST00000110839 N/A N/A N/A N/A N/A N/A 5.704±0.00 N/A 0.954±0.00 N/A N/A 5.564±0.00 N/A N/A
ENSMUST00000110840 5.749±1.19 10.862±1.98 5.848±0.87 5.115±0.81 4.123±0.53 12.292±0.10 6.395±1.61 9.001±1.59 3.992±1.02 8.023±1.02 N/A 10.088±5.25 4.209±1.60 N/A
ENSMUSG00000089026 ENSMUST00000158401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 38.007±0.00 105.160±0.00 N/A N/A

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