C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline-rich transmembrane protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000101059 Prrt3-201 ENSMUSG00000045009 10090 - 6:113494095-113501818 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000101059
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000101059 0.100±0.03 0.163±0.06 0.508±0.10 1.996±1.29 0.143±0.15 0.137±0.06 0.031±0.01 0.052±0.02 0.034±0.02 0.232±0.13 0.067±0.01 0.142±0.07 0.235±0.17 0.058±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00059A CIL_00059A_0002 CGP 6:113483297-113501818
CIL_0002CD CIL_0002CD_0002 CGP 6:113494095-113531638

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295984 PRRT3-003 nonsense_mediated_decay Homo_sapiens 0 1653
ENST00000412055 PRRT3-001 protein_coding Homo_sapiens 0 1653

Loading