C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005A9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000159753-ENSG00000102977 CGP 9606 16:67644919-67660815
GeneTranscriptPositionBiotype
ENSG00000159753 (RLTPR)
RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing 		ENST00000334583 (RLTPR-001) 67644919-67657569 protein_coding
ENST00000545661 (RLTPR-002) 67645247-67657518 protein_coding
ENST00000602321 (RLTPR-003) 67647869-67653205 retained_intron
ENST00000602368 (RLTPR-010) 67654518-67657569 nonsense_mediated_decay
ENST00000602467 (RLTPR-005) 67645165-67646247 retained_intron
ENST00000602562 (RLTPR-007) 67648507-67650120 retained_intron
ENST00000602563 (RLTPR-004) 67644988-67647612 nonsense_mediated_decay
ENST00000602633 (RLTPR-008) 67649925-67652008 retained_intron
ENST00000602705 (RLTPR-012) 67656840-67657566 retained_intron
ENST00000602742 (RLTPR-006) 67647447-67648477 retained_intron
ENST00000602924 (RLTPR-013) 67652965-67654461 retained_intron
ENST00000602931 (RLTPR-009) 67651886-67653213 retained_intron

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0005A9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050357-ENSMUSG00000038000 CGP 10090 8:105690906-105701095
GeneTranscriptPositionBiotype
ENSMUSG00000038000 (Acd)
adrenocortical dysplasia 		ENSMUST00000042608 (Acd-201) 105698159-105701095 protein_coding
ENSMUSG00000050357 (Rltpr)
RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing 		ENSMUST00000062574 (Rltpr-201) 105690906-105698178 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005A9_0001ENSG00000159753ENST00000334583ENST00000545661ENST00000602321ENST00000602368ENST00000602467ENST00000602562ENST00000602563ENST00000602633ENST00000602705ENST00000602742ENST00000602924ENST00000602931CIL_0005A9_0002ENSMUSG00000038000ENSMUST00000042608ENSMUSG00000050357ENSMUST00000062574
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005A9_0001ENSG00000159753ENST00000334583ENST00000545661ENST00000602368ENST00000602467ENST00000602562CIL_0005A9_0002ENSMUSG00000038000ENSMUST00000042608ENSMUSG00000050357ENSMUST00000062574
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000159753 ENST00000334583 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.031±0.00 N/A N/A N/A N/A
ENST00000545661 N/A N/A N/A N/A 0.051±0.00 0.076±0.00 N/A N/A N/A N/A N/A 2.003±0.00 N/A N/A
ENST00000602321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602368 N/A 26.743±0.00 N/A 13.184±0.00 N/A N/A N/A N/A N/A N/A N/A 0.329±0.00 N/A N/A
ENST00000602467 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.432±0.00 N/A N/A N/A N/A
ENST00000602562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.353±3.56 N/A N/A
ENST00000602563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038000 ENSMUST00000042608 15.969±2.18 18.022±3.24 8.950±0.46 21.891±8.24 19.992±6.82 13.198±2.31 5.968±1.40 14.231±1.12 8.980±1.95 14.561±2.09 2.068±0.35 15.783±6.82 9.195±4.81 17.387±6.90
ENSMUSG00000050357 ENSMUST00000062574 N/A N/A N/A 3.903±0.09 4.912±1.31 1.292±0.09 0.525±0.00 0.996±0.01 1.040±0.16 1.519±0.12 1.323±0.00 0.528±0.00 1.059±0.51 N/A

Loading