C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000334583 RLTPR-001 ENSG00000159753 9606 + 16:67644919-67657569 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LungENST00000334583
Transcript ID Lung
ENST00000334583 1.031±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LW CIL_0006LW_0002 CGP 16:67562407-67657569
CIL_0005A9 CIL_0005A9_0001 CGP 16:67644919-67660815

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001772 IEA immunological synapse
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005911 IEA cell-cell junction
GO:0008290 IEA F-actin capping protein complex
GO:0016020 IDA membrane
GO:0016477 IEA cell migration
GO:0030011 IEA maintenance of cell polarity
GO:0032729 IEA positive regulation of interferon-gamma production
GO:0042102 IEA positive regulation of T cell proliferation
GO:0045184 IEA establishment of protein localization
GO:0045591 IEA positive regulation of regulatory T cell differentiation
GO:0048538 IEA thymus development
GO:0048872 IEA homeostasis of number of cells
GO:0050852 IEA T cell receptor signaling pathway
GO:1900042 IEA positive regulation of interleukin-2 secretion
GO:1902715 IEA positive regulation of interferon-gamma secretion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062574 Rltpr-201 protein_coding Mus_musculus 0 2176

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