C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005AP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148488-ENSG00000165996 CGP 9606 10:17318383-17617377
GeneTranscriptPositionBiotype
ENSG00000148488 (ST8SIA6)
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6
ENST00000377602 (ST8SIA6-001) 17319874-17454330 protein_coding
ENST00000440449 (ST8SIA6-002) 17318383-17327109 protein_coding
ENSG00000204832 (ST8SIA6-AS1)
ST8SIA6 antisense RNA 1
ENST00000377597 (ST8SIA6-AS1-003) 17386951-17410631 antisense
ENST00000451190 (ST8SIA6-AS1-004) 17408027-17413503 antisense
ENST00000451225 (ST8SIA6-AS1-002) 17386994-17408286 antisense
ENST00000457649 (ST8SIA6-AS1-001) 17386936-17408286 antisense
ENSG00000236582 (PRPF38AP2)
PRP38 domain containing A pseudogene 2
ENST00000438179 (PRPF38AP2-001) 17577362-17578212 processed_pseudogene
ENSG00000280126 (AC069542.1)
ENST00000624816 (AC069542.1-201) 17602916-17603127 pseudogene
CIL_0005AP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000003418-ENSMUSG00000063275 CGP 10090 2:13651020-14056135
GeneTranscriptPositionBiotype
ENSMUSG00000003418 (St8sia6)
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6
ENSMUST00000003509 (St8sia6-001) 13651020-13793808 protein_coding
ENSMUST00000150781 (St8sia6-002) 13657154-13793293 processed_transcript
ENSMUSG00000063275 (Ptpla)
protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a
ENSMUST00000074854 (Ptpla-201) 14026902-14056135 protein_coding
ENSMUST00000091429 (Ptpla-003) 14026831-14056020 protein_coding
ENSMUST00000114753 (Ptpla-001) 14026831-14056023 protein_coding
ENSMUST00000131730 (Ptpla-002) 13975563-14056020 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005AP_0001ENSG00000148488ENST00000377602ENST00000440449ENSG00000204832ENST00000377597ENST00000451190ENST00000451225ENST00000457649ENSG00000236582ENST00000438179ENSG00000280126ENST00000624816CIL_0005AP_0002ENSMUSG00000003418ENSMUST00000003509ENSMUST00000150781ENSMUSG00000063275ENSMUST00000074854ENSMUST00000091429ENSMUST00000114753ENSMUST00000131730
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005AP_0001ENSG00000148488ENST00000377602ENST00000440449ENSG00000204832ENST00000377597ENST00000451190ENST00000451225ENST00000457649ENSG00000236582ENST00000438179ENSG00000280126ENST00000624816CIL_0005AP_0002ENSMUSG00000003418ENSMUST00000003509ENSMUST00000150781ENSMUSG00000063275ENSMUST00000074854ENSMUST00000091429ENSMUST00000114753ENSMUST00000131730
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148488 ENST00000377602 0.128±0.00 0.175±0.00 0.319±0.00 0.310±0.04 0.189±0.15 0.130±0.09 N/A 0.111±0.00 0.151±0.05 0.725±0.00 0.039±0.00 0.095±0.04 0.060±0.00 0.293±0.10
ENST00000440449 0.359±0.00 N/A N/A 0.456±0.00 0.145±0.01 0.686±0.00 N/A N/A 0.086±0.00 1.197±0.00 N/A N/A N/A N/A
ENSG00000204832 ENST00000377597 0.053±0.00 0.173±0.00 N/A 0.064±0.02 0.048±0.00 0.104±0.00 0.098±0.04 0.077±0.00 0.017±0.00 0.051±0.00 N/A 0.083±0.05 0.560±0.21 0.389±0.11
ENST00000451190 N/A N/A N/A N/A 0.061±0.00 N/A N/A N/A N/A N/A N/A 0.043±0.00 N/A N/A
ENST00000451225 N/A N/A N/A N/A 0.051±0.00 N/A 0.093±0.00 0.263±0.00 N/A N/A N/A N/A 5.356±1.25 N/A
ENST00000457649 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.273±0.00 N/A 0.135±0.00 1.767±0.44 2.246±0.00
ENSG00000236582 ENST00000438179 N/A 0.067±0.00 N/A 0.086±0.00 0.234±0.00 N/A 0.031±0.00 N/A 0.113±0.00 0.267±0.00 N/A N/A N/A N/A
ENSG00000280126 ENST00000624816 N/A 1.125±0.00 N/A 0.355±0.00 0.104±0.00 N/A N/A N/A N/A N/A 0.093±0.00 0.361±0.00 N/A 0.196±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003418 ENSMUST00000003509 0.506±0.10 0.337±0.15 6.695±0.42 0.248±0.06 2.786±1.54 0.539±0.13 0.417±0.09 3.090±0.57 0.010±0.00 0.790±0.35 0.106±0.00 1.179±0.43 0.122±0.02 0.039±0.01
ENSMUST00000150781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.238±0.00 0.175±0.00
ENSMUSG00000063275 ENSMUST00000074854 8.817±4.34 N/A 7.999±0.00 N/A 19.426±1.38 N/A 42.982±7.42 1.141±0.09 N/A 2.551±0.00 14.286±2.63 N/A N/A N/A
ENSMUST00000091429 21.379±2.30 31.409±3.53 43.626±7.73 9.717±7.77 15.243±6.88 48.290±6.18 9.273±2.15 11.988±2.59 22.723±11.07 14.275±3.71 N/A 35.095±13.71 11.422±5.76 21.369±9.81
ENSMUST00000114753 N/A 6.585±0.00 14.536±4.14 N/A N/A N/A 7.973±2.71 N/A N/A 2.156±0.52 52.794±7.05 9.074±2.34 N/A N/A
ENSMUST00000131730 5.473±0.00 N/A N/A 1.181±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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