C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000003509 St8sia6-001 ENSMUSG00000003418 10090 - 2:13651020-13793808 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003509
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003509 0.506±0.10 0.337±0.15 6.695±0.42 0.248±0.06 2.786±1.54 0.539±0.13 0.417±0.09 3.090±0.57 0.010±0.00 0.790±0.35 0.106±0.00 1.179±0.43 0.122±0.02 0.039±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AO CIL_0005AO_0002 CGP 2:13573927-13793808
CIL_0005AP CIL_0005AP_0002 CGP 2:13651020-14056135

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001574 IDA ganglioside biosynthetic process
GO:0006493 IDA protein O-linked glycosylation
GO:0008373 IDA sialyltransferase activity
GO:0009100 IDA glycoprotein metabolic process
GO:0009247 IDA glycolipid biosynthetic process
GO:0009311 IDA oligosaccharide metabolic process
GO:0016051 IDA carbohydrate biosynthetic process
GO:0030173 IEA integral component of Golgi membrane
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000103232 foxf2b-001 protein_coding Danio_rerio 0.00004 55

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