C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000091429 Ptpla-003 ENSMUSG00000063275 10090 - 2:14026831-14056020 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000091429
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000091429 21.379±2.30 31.409±3.53 43.626±7.73 9.717±7.77 15.243±6.88 48.290±6.18 9.273±2.15 11.988±2.59 22.723±11.07 14.275±3.71 35.095±13.71 11.422±5.76 21.369±9.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AP CIL_0005AP_0002 CGP 2:13651020-14056135
CIL_0006BI CIL_0006BI_0002 CGP 2:13975563-14148338

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0010389 IMP regulation of G2/M transition of mitotic cell cycle
GO:0014902 IGI myotube differentiation
GO:2000045 IMP regulation of G1/S transition of mitotic cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361271 PTPLA-001 protein_coding Homo_sapiens 0 497
ENST00000466335 PTPLA-003 protein_coding Homo_sapiens 0 457
ENST00000471481 PTPLA-005 retained_intron Homo_sapiens 2e-32 143
ENST00000498812 PTPLA-004 nonsense_mediated_decay Homo_sapiens 0 501

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