C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074854 Ptpla-201 ENSMUSG00000063275 10090 - 2:14026902-14056135 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastHeartKidneyLungMuscleENSMUST00000074854
Transcript ID Adipose Bladder Breast Heart Kidney Lung Muscle
ENSMUST00000074854 8.817±4.34 7.999±0.00 19.426±1.38 42.982±7.42 1.141±0.09 2.551±0.00 14.286±2.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AP CIL_0005AP_0002 CGP 2:13651020-14056135
CIL_0006BI CIL_0006BI_0002 CGP 2:13975563-14148338

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0006633 IEA fatty acid biosynthetic process
GO:0007275 IEA multicellular organismal development
GO:0010389 IMP regulation of G2/M transition of mitotic cell cycle
GO:0014902 IGI myotube differentiation
GO:0016021 IEA integral component of membrane
GO:0016829 IEA lyase activity
GO:2000045 IMP regulation of G1/S transition of mitotic cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361271 PTPLA-001 protein_coding Homo_sapiens 0 939
ENST00000466335 PTPLA-003 protein_coding Homo_sapiens 0 628
ENST00000471481 PTPLA-005 retained_intron Homo_sapiens 0 510
ENST00000498812 PTPLA-004 nonsense_mediated_decay Homo_sapiens 1e-33 147

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