C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005DD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000132563-ENSG00000120738 CGP 9606 5:138439017-138469315
GeneTranscriptPositionBiotype
ENSG00000120738 (EGR1)
early growth response 1
ENST00000239938 (EGR1-001) 138465490-138469315 protein_coding
ENSG00000132563 (REEP2)
receptor accessory protein 2
ENST00000254901 (REEP2-002) 138439087-138446969 protein_coding
ENST00000378339 (REEP2-001) 138439017-138446964 protein_coding
ENST00000464751 (REEP2-008) 138439110-138443858 processed_transcript
ENST00000503379 (REEP2-006) 138439111-138444705 retained_intron
ENST00000504163 (REEP2-009) 138444998-138445723 retained_intron
ENST00000506158 (REEP2-003) 138439102-138445831 protein_coding
ENST00000507511 (REEP2-005) 138439111-138445349 nonsense_mediated_decay
ENST00000507635 (REEP2-007) 138444328-138445798 retained_intron
ENST00000510467 (REEP2-010) 138439168-138445118 retained_intron
ENST00000512126 (REEP2-004) 138439682-138445269 protein_coding
ENST00000613650 (REEP2-201) 138441016-138446964 protein_coding
CIL_0005DD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038555-ENSMUSG00000038418 CGP 10090 18:34840589-34864984
GeneTranscriptPositionBiotype
ENSMUSG00000038418 (Egr1)
early growth response 1
ENSMUST00000064795 (Egr1-001) 34859823-34864984 protein_coding
ENSMUST00000165033 (Egr1-201) 34861207-34864956 protein_coding
ENSMUSG00000038555 (Reep2)
receptor accessory protein 2
ENSMUST00000043484 (Reep2-201) 34840589-34847463 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005DD_0001ENSG00000120738ENST00000239938ENSG00000132563ENST00000254901ENST00000378339ENST00000464751ENST00000503379ENST00000504163ENST00000506158ENST00000507511ENST00000507635ENST00000510467ENST00000512126ENST00000613650CIL_0005DD_0002ENSMUSG00000038418ENSMUST00000064795ENSMUST00000165033ENSMUSG00000038555ENSMUST00000043484
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005DD_0001ENSG00000120738ENST00000239938ENSG00000132563ENST00000254901ENST00000378339ENST00000464751ENST00000503379ENST00000506158ENST00000507635ENST00000510467ENST00000512126ENST00000613650CIL_0005DD_0002ENSMUSG00000038418ENSMUST00000064795ENSMUST00000165033ENSMUSG00000038555ENSMUST00000043484
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120738 ENST00000239938 298.150±0.00 104.972±0.00 5.117±0.00 9.378±6.55 156.874±149.04 29.049±26.56 3.312±2.44 16.576±16.05 26.947±22.21 36.046±33.19 9.666±2.46 124.827±118.46 44.308±1.19 17.622±10.39
ENSG00000132563 ENST00000254901 N/A 0.260±0.00 N/A 13.461±0.00 4.897±0.00 N/A 0.836±0.00 N/A N/A N/A N/A 0.622±0.52 N/A N/A
ENST00000378339 0.620±0.00 N/A N/A 5.310±0.00 0.205±0.00 1.496±0.00 N/A N/A N/A N/A N/A 1.218±0.00 N/A 3.069±0.00
ENST00000464751 N/A 2.175±0.00 N/A N/A N/A N/A N/A 1.482±0.00 0.036±0.00 0.608±0.00 N/A N/A N/A N/A
ENST00000503379 N/A N/A N/A N/A N/A 1.721±0.00 N/A N/A N/A 0.766±0.00 2.472±0.00 N/A N/A N/A
ENST00000504163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.159±0.00 N/A
ENST00000507511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507635 1.529±0.00 0.771±0.00 N/A 7.341±0.00 N/A N/A 1.184±0.00 N/A N/A N/A N/A 0.328±0.06 N/A 3.079±0.00
ENST00000510467 N/A N/A N/A 8.584±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512126 N/A N/A N/A N/A N/A 0.597±0.00 0.574±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000613650 3.165±0.00 0.150±0.00 N/A 24.560±19.97 2.501±0.00 6.164±0.00 0.940±0.82 N/A 0.267±0.25 N/A 1.098±0.00 2.710±1.83 0.363±0.16 5.226±2.74
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038418 ENSMUST00000064795 0.721±0.00 6.677±0.99 0.815±0.35 0.212±0.09 5.179±2.24 2.072±0.44 N/A 0.224±0.03 0.579±0.26 1.642±0.65 0.112±0.00 13.269±2.43 0.390±0.30 0.453±0.13
ENSMUST00000165033 7.333±0.94 5.372±0.86 6.667±2.29 6.173±7.15 17.245±7.91 6.925±2.39 5.407±0.53 1.896±0.24 2.396±1.23 7.883±3.02 1.021±0.17 23.761±15.33 0.925±0.44 1.954±1.26
ENSMUSG00000038555 ENSMUST00000043484 1.742±0.88 5.777±0.99 10.451±0.19 36.178±3.12 0.375±0.19 1.443±0.33 0.245±0.17 0.482±0.10 0.401±0.37 0.573±0.15 0.148±0.06 7.066±0.92 0.634±0.50 49.596±19.40

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