C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: receptor accessory protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043484 Reep2-201 ENSMUSG00000038555 10090 + 18:34840589-34847463 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043484
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043484 1.742±0.88 5.777±0.99 10.451±0.19 36.178±3.12 0.375±0.19 1.443±0.33 0.245±0.17 0.482±0.10 0.401±0.37 0.573±0.15 0.148±0.06 7.066±0.92 0.634±0.50 49.596±19.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005D6 CIL_0005D6_0002 CGP 18:34777008-34847463
CIL_0005DD CIL_0005DD_0002 CGP 18:34840589-34864984

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 ISS endoplasmic reticulum
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005881 ISS cytoplasmic microtubule
GO:0005887 IDA integral component of plasma membrane
GO:0031883 IPI taste receptor binding
GO:0032386 IDA regulation of intracellular transport
GO:0032596 IDA protein transport into membrane raft
GO:0050913 IGI sensory perception of bitter taste
GO:0050916 IGI sensory perception of sweet taste
GO:0070062 IEA extracellular vesicular exosome
GO:0071786 ISS endoplasmic reticulum tubular network organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254901 REEP2-002 protein_coding Homo_sapiens 0 939
ENST00000378339 REEP2-001 protein_coding Homo_sapiens 0 985
ENST00000464751 REEP2-008 processed_transcript Homo_sapiens 0 281
ENST00000503379 REEP2-006 retained_intron Homo_sapiens 0 451
ENST00000504163 REEP2-009 retained_intron Homo_sapiens 0 335
ENST00000506158 REEP2-003 protein_coding Homo_sapiens 0 863
ENST00000507511 REEP2-005 nonsense_mediated_decay Homo_sapiens 0 449
ENST00000507635 REEP2-007 retained_intron Homo_sapiens 0 704
ENST00000510467 REEP2-010 retained_intron Homo_sapiens 0 617
ENST00000512126 REEP2-004 protein_coding Homo_sapiens 0 595
ENST00000613650 REEP2-201 protein_coding Homo_sapiens 0 889

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