C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005FS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000126001-ENSG00000125975 CGP 9606 20:35455164-35529652
GeneTranscriptPositionBiotype
ENSG00000125975 (C20orf173)
chromosome 20 open reading frame 173 		ENST00000246199 (C20orf173-001) 35526971-35529619 protein_coding
ENST00000374345 (C20orf173-004) 35523186-35529652 protein_coding
ENST00000424444 (C20orf173-002) 35528745-35529623 protein_coding
ENST00000444723 (C20orf173-201) 35526971-35529652 protein_coding
ENSG00000242507 (RP3-477O4.5)
 ENST00000422009 (RP3-477O4.5-002) 35520852-35528255 processed_transcript
ENST00000432650 (RP3-477O4.5-003) 35522236-35523259 processed_transcript
ENST00000450773 (RP3-477O4.5-001) 35521084-35523173 transcribed_unprocessed_pseudogene

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0005FS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038241-ENSMUSG00000074646 CGP 10090 2:155956458-156007977
GeneTranscriptPositionBiotype
ENSMUSG00000038241 (Cep250)
centrosomal protein 250 		ENSMUST00000039994 (Cep250-201) 155956558-155998900 protein_coding
ENSMUST00000094421 (Cep250-202) 155956558-155998900 protein_coding
ENSMUST00000109618 (Cep250-003) 155956594-155967794 protein_coding
ENSMUST00000109619 (Cep250-001) 155956558-155998900 protein_coding
ENSMUST00000128683 (Cep250-008) 155985915-155990596 nonsense_mediated_decay
ENSMUST00000148191 (Cep250-005) 155976389-155998900 retained_intron
ENSMUST00000149905 (Cep250-004) 155956458-155986613 retained_intron
ENSMUST00000151569 (Cep250-009) 155956572-155974445 protein_coding
ENSMUST00000155160 (Cep250-006) 155979558-155981445 retained_intron
ENSMUST00000156355 (Cep250-007) 155985883-155989603 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005FS_0001ENSG00000125975ENST00000246199ENST00000374345ENST00000424444ENST00000444723ENSG00000242507ENST00000422009ENST00000432650ENST00000450773CIL_0005FS_0002ENSMUSG00000038241ENSMUST00000039994ENSMUST00000094421ENSMUST00000109618ENSMUST00000109619ENSMUST00000128683ENSMUST00000148191ENSMUST00000149905ENSMUST00000151569ENSMUST00000155160ENSMUST00000156355
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005FS_0001ENSG00000125975ENST00000246199ENST00000374345ENST00000424444ENST00000444723ENSG00000242507ENST00000422009CIL_0005FS_0002ENSMUSG00000038241ENSMUST00000039994ENSMUST00000094421ENSMUST00000109619ENSMUST00000148191
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125975 ENST00000246199 N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.091±0.00 N/A 8.993±0.00
ENST00000374345 N/A N/A N/A N/A 0.023±0.00 0.230±0.00 N/A N/A N/A 0.335±0.00 0.107±0.00 N/A N/A 10.727±0.00
ENST00000424444 N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.770±0.00
ENSG00000242507 ENST00000422009 0.012±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038241 ENSMUST00000039994 1.186±0.00 1.635±0.22 N/A 1.111±0.00 1.181±0.09 0.542±0.09 0.469±0.00 1.111±0.36 0.518±0.06 1.357±0.45 0.373±0.08 2.200±2.22 6.294±0.00 N/A
ENSMUST00000094421 1.132±0.03 N/A 0.714±0.00 10.483±0.00 0.852±0.16 0.644±0.00 0.497±0.18 0.465±0.05 0.728±0.48 0.773±0.00 0.330±0.00 0.793±0.04 1.469±1.05 12.941±0.00
ENSMUST00000109618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109619 1.464±0.13 0.876±0.20 1.656±0.22 5.478±1.83 1.632±0.49 1.132±0.33 0.516±0.05 1.190±0.28 1.481±1.08 1.760±0.59 0.670±0.12 3.371±3.59 2.492±0.64 4.460±3.01
ENSMUST00000128683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148191 2.606±0.00 1.103±0.36 2.351±0.28 3.529±1.32 2.050±0.78 1.575±0.35 0.449±0.11 0.970±0.17 3.989±2.68 1.384±0.40 0.418±0.12 4.020±2.69 3.554±2.87 1.341±0.24
ENSMUST00000149905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading