C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005FS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000126001-ENSG00000125975 CGP 9606 20:35455164-35529652
GeneTranscriptPositionBiotype
ENSG00000125975 (C20orf173)
chromosome 20 open reading frame 173 		ENST00000246199 (C20orf173-001) 35526971-35529619 protein_coding
ENST00000374345 (C20orf173-004) 35523186-35529652 protein_coding
ENST00000424444 (C20orf173-002) 35528745-35529623 protein_coding
ENST00000444723 (C20orf173-201) 35526971-35529652 protein_coding
ENSG00000242507 (RP3-477O4.5)
 ENST00000422009 (RP3-477O4.5-002) 35520852-35528255 processed_transcript
ENST00000432650 (RP3-477O4.5-003) 35522236-35523259 processed_transcript
ENST00000450773 (RP3-477O4.5-001) 35521084-35523173 transcribed_unprocessed_pseudogene
CIL_0005FS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038241-ENSMUSG00000074646 CGP 10090 2:155956458-156007977
GeneTranscriptPositionBiotype
ENSMUSG00000038241 (Cep250)
centrosomal protein 250 		ENSMUST00000039994 (Cep250-201) 155956558-155998900 protein_coding
ENSMUST00000094421 (Cep250-202) 155956558-155998900 protein_coding
ENSMUST00000109618 (Cep250-003) 155956594-155967794 protein_coding
ENSMUST00000109619 (Cep250-001) 155956558-155998900 protein_coding
ENSMUST00000128683 (Cep250-008) 155985915-155990596 nonsense_mediated_decay
ENSMUST00000148191 (Cep250-005) 155976389-155998900 retained_intron
ENSMUST00000149905 (Cep250-004) 155956458-155986613 retained_intron
ENSMUST00000151569 (Cep250-009) 155956572-155974445 protein_coding
ENSMUST00000155160 (Cep250-006) 155979558-155981445 retained_intron
ENSMUST00000156355 (Cep250-007) 155985883-155989603 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005FS_0001ENSG00000125975ENST00000246199ENST00000374345ENST00000424444ENST00000444723ENSG00000242507ENST00000422009ENST00000432650ENST00000450773CIL_0005FS_0002ENSMUSG00000038241ENSMUST00000039994ENSMUST00000094421ENSMUST00000109618ENSMUST00000109619ENSMUST00000128683ENSMUST00000148191ENSMUST00000149905ENSMUST00000151569ENSMUST00000155160ENSMUST00000156355
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005FS_0001ENSG00000125975ENST00000246199ENST00000374345ENST00000424444ENST00000444723ENSG00000242507ENST00000422009CIL_0005FS_0002ENSMUSG00000038241ENSMUST00000039994ENSMUST00000094421ENSMUST00000109619ENSMUST00000148191
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125975 ENST00000246199 N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.091±0.00 N/A 8.993±0.00
ENST00000374345 N/A N/A N/A N/A 0.023±0.00 0.230±0.00 N/A N/A N/A 0.335±0.00 0.107±0.00 N/A N/A 10.727±0.00
ENST00000424444 N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.770±0.00
ENSG00000242507 ENST00000422009 0.012±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038241 ENSMUST00000039994 1.186±0.00 1.635±0.22 N/A 1.111±0.00 1.181±0.09 0.542±0.09 0.469±0.00 1.111±0.36 0.518±0.06 1.357±0.45 0.373±0.08 2.200±2.22 6.294±0.00 N/A
ENSMUST00000094421 1.132±0.03 N/A 0.714±0.00 10.483±0.00 0.852±0.16 0.644±0.00 0.497±0.18 0.465±0.05 0.728±0.48 0.773±0.00 0.330±0.00 0.793±0.04 1.469±1.05 12.941±0.00
ENSMUST00000109618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109619 1.464±0.13 0.876±0.20 1.656±0.22 5.478±1.83 1.632±0.49 1.132±0.33 0.516±0.05 1.190±0.28 1.481±1.08 1.760±0.59 0.670±0.12 3.371±3.59 2.492±0.64 4.460±3.01
ENSMUST00000128683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148191 2.606±0.00 1.103±0.36 2.351±0.28 3.529±1.32 2.050±0.78 1.575±0.35 0.449±0.11 0.970±0.17 3.989±2.68 1.384±0.40 0.418±0.12 4.020±2.69 3.554±2.87 1.341±0.24
ENSMUST00000149905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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