C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: centrosomal protein 250
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109619 Cep250-001 ENSMUSG00000038241 10090 + 2:155956558-155998900 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109619
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109619 1.464±0.13 0.876±0.20 1.656±0.22 5.478±1.83 1.632±0.49 1.132±0.33 0.516±0.05 1.190±0.28 1.481±1.08 1.760±0.59 0.670±0.12 3.371±3.59 2.492±0.64 4.460±3.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EI CIL_0008EI_0002 VISTA 2:155562263-156164147
CIL_0002I5 CIL_0002I5_0002 CGP 2:155941023-155998900
CIL_0005FS CIL_0005FS_0002 CGP 2:155956458-156007977

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 IEA mitotic cell cycle
GO:0005515 IEA protein binding
GO:0005813 IEA centrosome
GO:0005814 IDA centriole
GO:0008022 IEA protein C-terminus binding
GO:0008104 IEA protein localization
GO:0010457 IEA centriole-centriole cohesion
GO:0019901 IEA protein kinase binding
GO:0019904 IEA protein domain specific binding
GO:0030997 IEA regulation of centriole-centriole cohesion
GO:0031616 IDA spindle pole centrosome
GO:0033365 IEA protein localization to organelle
GO:0043234 IEA protein complex
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000397524 CEP250-006 protein_coding Homo_sapiens 0 1059
ENST00000397527 CEP250-001 protein_coding Homo_sapiens 0 4261
ENST00000422671 CEP250-011 protein_coding Homo_sapiens 0 1437
ENST00000425934 CEP250-012 protein_coding Homo_sapiens 0 1423
ENST00000461386 CEP250-013 nonsense_mediated_decay Homo_sapiens 0 1441
ENST00000474829 CEP250-009 retained_intron Homo_sapiens 0 259

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