C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: centrosomal protein 250
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000094421 Cep250-202 ENSMUSG00000038241 10090 + 2:155956558-155998900 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000094421
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000094421 1.132±0.03 0.714±0.00 10.483±0.00 0.852±0.16 0.644±0.00 0.497±0.18 0.465±0.05 0.728±0.48 0.773±0.00 0.330±0.00 0.793±0.04 1.469±1.05 12.941±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EI CIL_0008EI_0002 VISTA 2:155562263-156164147
CIL_0002I5 CIL_0002I5_0002 CGP 2:155941023-155998900
CIL_0005FS CIL_0005FS_0002 CGP 2:155956458-156007977

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005814 IDA centriole
GO:0005929 IEA cilium
GO:0007049 IEA cell cycle
GO:0031616 IDA spindle pole centrosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000397524 CEP250-006 protein_coding Homo_sapiens 0 1059
ENST00000397527 CEP250-001 protein_coding Homo_sapiens 0 5600
ENST00000422671 CEP250-011 protein_coding Homo_sapiens 0 1437
ENST00000425934 CEP250-012 protein_coding Homo_sapiens 0 2148
ENST00000461386 CEP250-013 nonsense_mediated_decay Homo_sapiens 0 1628
ENST00000474829 CEP250-009 retained_intron Homo_sapiens 0 259

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