C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005HG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000077147-ENSG00000155629 CGP 9606 10:96518109-96720514
GeneTranscriptPositionBiotype
ENSG00000077147 (TM9SF3)
transmembrane 9 superfamily member 3 		ENST00000371142 (TM9SF3-001) 96518109-96587052 protein_coding
ENST00000443638 (TM9SF3-003) 96551311-96587452 protein_coding
ENST00000464654 (TM9SF3-005) 96553024-96577542 processed_transcript
ENST00000475401 (TM9SF3-004) 96576345-96586759 processed_transcript
ENST00000485093 (TM9SF3-006) 96522277-96528173 processed_transcript
ENST00000490192 (TM9SF3-002) 96543601-96552943 processed_transcript
ENSG00000155629 (PIK3AP1)
phosphoinositide-3-kinase adaptor protein 1 		ENST00000339364 (PIK3AP1-001) 96593312-96720514 protein_coding
ENST00000371109 (PIK3AP1-004) 96595208-96633241 protein_coding
ENST00000371110 (PIK3AP1-002) 96594495-96669611 protein_coding
ENST00000467625 (PIK3AP1-006) 96595565-96618788 processed_transcript
ENST00000468783 (PIK3AP1-003) 96628398-96700878 processed_transcript
ENST00000489982 (PIK3AP1-007) 96603740-96620411 processed_transcript
ENSG00000202047 (RNA5SP324)
RNA, 5S ribosomal pseudogene 324 		ENST00000365177 (RNA5SP324-201) 96619376-96619483 rRNA
ENSG00000227032 (RP11-34E5.4)
 ENST00000456516 (RP11-34E5.4-001) 96620877-96621707 processed_pseudogene
ENSG00000235677 (NPM1P26)
nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 26 		ENST00000426339 (NPM1P26-001) 96560185-96560922 processed_pseudogene
CIL_0005HG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025016-ENSMUSG00000025017 CGP 10090 19:41210842-41385070
GeneTranscriptPositionBiotype
ENSMUSG00000025016 (Tm9sf3)
transmembrane 9 superfamily member 3 		ENSMUST00000025989 (Tm9sf3-201) 41210842-41264004 protein_coding
ENSMUSG00000025017 (Pik3ap1)
phosphoinositide-3-kinase adaptor protein 1 		ENSMUST00000059672 (Pik3ap1-201) 41274218-41385070 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005HG_0001ENSG00000077147ENST00000371142ENST00000443638ENST00000464654ENST00000475401ENST00000485093ENST00000490192ENSG00000155629ENST00000339364ENST00000371109ENST00000371110ENST00000467625ENST00000468783ENST00000489982ENSG00000202047ENST00000365177ENSG00000227032ENST00000456516ENSG00000235677ENST00000426339CIL_0005HG_0002ENSMUSG00000025016ENSMUST00000025989ENSMUSG00000025017ENSMUST00000059672
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005HG_0001ENSG00000077147ENST00000371142ENST00000443638ENST00000464654ENSG00000155629ENST00000339364ENST00000371110ENST00000468783ENSG00000202047ENST00000365177ENSG00000227032ENST00000456516ENSG00000235677ENST00000426339CIL_0005HG_0002ENSMUSG00000025016ENSMUST00000025989ENSMUSG00000025017ENSMUST00000059672
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000077147 ENST00000371142 29.646±0.00 20.130±0.00 7.539±0.00 16.264±5.59 25.569±3.51 30.495±5.36 8.828±4.83 20.953±9.38 18.404±1.98 19.477±6.78 4.809±2.61 27.896±8.96 17.320±7.31 20.764±6.42
ENST00000443638 N/A N/A N/A N/A N/A N/A N/A 35.272±0.00 36.006±0.00 N/A 6.030±0.00 59.474±8.65 57.670±0.00 21.194±0.00
ENST00000464654 N/A N/A 40.650±0.00 20.438±0.00 N/A 76.792±0.00 N/A N/A N/A 36.078±0.00 N/A N/A N/A N/A
ENST00000475401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000155629 ENST00000339364 2.026±0.00 2.993±0.00 N/A 0.336±0.25 0.630±0.00 0.630±0.00 0.241±0.15 4.538±2.21 3.836±3.46 3.125±1.82 0.237±0.00 1.910±1.57 4.417±0.94 N/A
ENST00000371109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371110 N/A N/A 1.738±0.00 0.152±0.00 2.085±0.00 N/A 0.711±0.00 4.778±0.00 1.025±0.00 3.337±0.00 0.173±0.00 2.196±0.00 N/A N/A
ENST00000467625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468783 N/A N/A N/A 0.906±0.00 N/A 0.633±0.00 N/A N/A N/A 2.640±0.00 N/A N/A 3.549±0.00 1.001±0.00
ENST00000489982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000202047 ENST00000365177 N/A N/A N/A N/A N/A N/A 0.532±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000227032 ENST00000456516 N/A 0.213±0.00 N/A N/A 1.741±0.00 0.062±0.00 N/A 2.440±0.00 0.086±0.00 0.965±0.85 N/A 0.353±0.24 N/A 0.058±0.00
ENSG00000235677 ENST00000426339 0.043±0.00 0.091±0.00 N/A 0.220±0.00 3.076±0.00 N/A 0.162±0.00 0.594±0.00 0.579±0.54 0.181±0.00 0.188±0.00 0.612±0.73 0.059±0.04 0.053±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025016 ENSMUST00000025989 27.497±8.04 40.627±9.52 41.705±1.01 23.935±3.48 34.882±13.91 60.871±23.42 12.850±0.78 34.398±1.70 23.568±7.99 49.757±5.01 12.096±0.61 53.781±14.61 25.250±11.65 13.138±3.83
ENSMUSG00000025017 ENSMUST00000059672 1.924±0.00 1.915±0.42 N/A 0.781±0.00 3.381±0.43 1.072±0.53 0.438±0.00 0.756±0.00 5.130±0.68 5.386±0.74 0.073±0.03 3.099±2.31 1.821±0.77 0.738±0.32

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